RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 RGPD5Q99666 1765 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 KIF3CO14782 793 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 LGR5O75473 907 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 SURF6O75683 361 aaKnown RBP9.53□□□□□ -0.88
NDE1-202ENST00000396355 PROSER3Q2NL68 480 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 FLAD1Q8NFF5 587 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 IP6K1Q92551 441 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 MIEF2Q96C03 454 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 KIF1BPQ96EK5 621 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 BABAM1Q9NWV8 329 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 CPA1P15085 419 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 ETF1P62495 437 aaKnown RBP9.53□□□□□ -0.88
NDE1-202ENST00000396355 USP4Q13107 963 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 CCDC144BQ3MJ40 725 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 OLFM4Q6UX06 510 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 PPFIBP1Q86W92 1011 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 CCDC144CPQ8IYA2 1237 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 PARD3BQ8TEW8 1205 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 ZNHIT6Q9NWK9 470 aaKnown RBP9.53□□□□□ -0.88
NDE1-202ENST00000396355 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 TMOD3Q9NYL9 352 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 C9orf78Q9NZ63 289 aaPredicted RBP9.53□□□□□ -0.88
NDE1-202ENST00000396355 RNF40O75150 1001 aa9.52□□□□□ -0.88
NDE1-202ENST00000396355 PPP1R7Q15435 360 aa9.52□□□□□ -0.88
NDE1-202ENST00000396355 ZNF569Q5MCW4 686 aa9.52□□□□□ -0.88
NDE1-202ENST00000396355 TCERG1LQ5VWI1 586 aa9.52□□□□□ -0.88
NDE1-202ENST00000396355 CC2D1AQ6P1N0 951 aaPredicted RBP9.52□□□□□ -0.88
NDE1-202ENST00000396355 MAATS1Q7Z4T9 603 aa9.52□□□□□ -0.88
NDE1-202ENST00000396355 MYLK4Q86YV6 388 aaPredicted RBP9.52□□□□□ -0.88
NDE1-202ENST00000396355 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.88
NDE1-202ENST00000396355 LRRN4CLQ8ND94 238 aa9.52□□□□□ -0.88
NDE1-202ENST00000396355 JAKMIP1Q96N16 626 aaKnown RBP9.52□□□□□ -0.88
NDE1-202ENST00000396355 ZCWPW1Q9H0M4 648 aa9.52□□□□□ -0.88
NDE1-202ENST00000396355 CPDO75976 1380 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 RPAP1Q9BWH6 1393 aaPredicted RBP9.52□□□□□ -0.89
NDE1-202ENST00000396355 CCDC160A6NGH7 325 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 GNPATO15228 680 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 EPB41L2O43491 1005 aaKnown RBP9.52□□□□□ -0.89
NDE1-202ENST00000396355 GCFC2P16383 781 aaKnown RBP9.52□□□□□ -0.89
NDE1-202ENST00000396355 MYO1EQ12965 1108 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 HHATQ5VTY9 493 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 KCTD16Q68DU8 428 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 CAPRIN2Q6IMN6 1127 aaKnown RBP9.52□□□□□ -0.89
NDE1-202ENST00000396355 B4GALNT4Q76KP1 1039 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 RASEFQ8IZ41 740 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 NLGN2Q8NFZ4 835 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 TCP11Q8WWU5 503 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 ERBB3P21860 1342 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 AOX1Q06278 1338 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 HOOK3Q86VS8 718 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 CCDC170Q8IYT3 715 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 WHAMMQ8TF30 809 aa9.52□□□□□ -0.89
NDE1-202ENST00000396355 PPANQ9NQ55 473 aaKnown RBP9.52□□□□□ -0.89
NDE1-202ENST00000396355 F13A1P00488 732 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 CCT2P78371 535 aaKnown RBP9.51□□□□□ -0.89
NDE1-202ENST00000396355 APOBRQ0VD83 1088 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 COL9A3Q14050 684 aaPredicted RBP9.51□□□□□ -0.89
NDE1-202ENST00000396355 ZNF827Q17R98 1081 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 TSC22D3Q99576 134 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 SUGCTQ9HAC7 445 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 ANKRD18BA2A2Z9 1011 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 SGSM2O43147 1006 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 IGBP1P78318 339 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 CCDC158Q5M9N0 1113 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 CLASRPQ8N2M8 674 aaKnown RBP9.51□□□□□ -0.89
NDE1-202ENST00000396355 JMYQ8N9B5 988 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 FAM114A2Q9NRY5 505 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 DDX19AQ9NUU7 478 aaKnown RBP9.51□□□□□ -0.89
NDE1-202ENST00000396355 CHCHD3Q9NX63 227 aaKnown RBP9.51□□□□□ -0.89
NDE1-202ENST00000396355 SPG7Q9UQ90 795 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 NCAPD2Q15021 1401 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 CAMTA1Q9Y6Y1 1673 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 SMIM23A6NLE4 172 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 RFC4P35249 363 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 UBASH3AP57075 661 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 TRAF1Q13077 416 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 CCDC150Q8NCX0 1101 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 DESI2Q9BSY9 194 aa9.51□□□□□ -0.89
NDE1-202ENST00000396355 LSG1Q9H089 658 aaKnown RBP9.51□□□□□ -0.89
NDE1-202ENST00000396355 C5P01031 1676 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 EFCAB8A8MWE9 144 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 STK38Q15208 465 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 STX1AQ16623 288 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 C1orf141Q5JVX7 400 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 TRIM74Q86UV6 250 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 TRIM73Q86UV7 250 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 MORC4Q8TE76 937 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 ABCF2Q9UG63 623 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 TPCN1Q9ULQ1 816 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 SNX14Q9Y5W7 946 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 PDCP20941 246 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 TPP2P29144 1249 aaPredicted RBP9.5□□□□□ -0.89
NDE1-202ENST00000396355 INTS4Q96HW7 963 aaKnown RBP9.5□□□□□ -0.89
NDE1-202ENST00000396355 TTC14Q96N46 770 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 ARHGAP25P42331 645 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 PTGER2P43116 358 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 CCNHP51946 323 aaPredicted RBP9.5□□□□□ -0.89
NDE1-202ENST00000396355 STIM1Q13586 685 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms