RNA–Protein interactions for RNA: ENST00000395837.1

UBB-202, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBB, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-202ENST00000395837 SLC17A8Q8NDX2 589 aa12.06□□□□□ -0.48
UBB-202ENST00000395837 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
UBB-202ENST00000395837 OSBPL5Q9H0X9 879 aaPredicted RBP12.06□□□□□ -0.48
UBB-202ENST00000395837 SNRKQ9NRH2 765 aa12.06□□□□□ -0.48
UBB-202ENST00000395837 SLC45A1Q9Y2W3 748 aa12.06□□□□□ -0.48
UBB-202ENST00000395837 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.06□□□□□ -0.48
UBB-202ENST00000395837 GNAI2P04899 355 aa12.05□□□□□ -0.48
UBB-202ENST00000395837 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
UBB-202ENST00000395837 CRACR2BQ8N4Y2 399 aaPredicted RBP12.05□□□□□ -0.48
UBB-202ENST00000395837 SH3RF3Q8TEJ3 882 aaPredicted RBP12.05□□□□□ -0.48
UBB-202ENST00000395837 NSUN4Q96CB9 384 aaKnown RBP12.05□□□□□ -0.48
UBB-202ENST00000395837 AS3MTQ9HBK9 375 aa12.05□□□□□ -0.48
UBB-202ENST00000395837 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
UBB-202ENST00000395837 AATFQ9NY61 560 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBB-202ENST00000395837 PDS5AQ29RF7 1337 aaKnown RBP12.05□□□□□ -0.48
UBB-202ENST00000395837 TRIOBPQ9H2D6 2365 aa12.05□□□□□ -0.48
UBB-202ENST00000395837 MGAMO43451 1857 aa12.04□□□□□ -0.48
UBB-202ENST00000395837 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
UBB-202ENST00000395837 IPO8O15397 1037 aaKnown RBP12.04□□□□□ -0.48
UBB-202ENST00000395837 MTMR2Q13614 643 aa12.04□□□□□ -0.48
UBB-202ENST00000395837 NAA16Q6N069 864 aaPredicted RBP12.04□□□□□ -0.48
UBB-202ENST00000395837 MAPKAPK5Q8IW41 473 aa12.04□□□□□ -0.48
UBB-202ENST00000395837 CCAR1Q8IX12 1150 aaKnown RBP12.04□□□□□ -0.48
UBB-202ENST00000395837 C7orf61Q8IZ16 206 aa12.04□□□□□ -0.48
UBB-202ENST00000395837 TRMT2AQ8IZ69 625 aaKnown RBP12.04□□□□□ -0.48
UBB-202ENST00000395837 PROCA1Q8NCQ7 364 aaPredicted RBP12.04□□□□□ -0.48
UBB-202ENST00000395837 PXYLP1Q8TE99 480 aa12.04□□□□□ -0.48
UBB-202ENST00000395837 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
UBB-202ENST00000395837 PAWRQ96IZ0 340 aaKnown RBP12.04□□□□□ -0.48
UBB-202ENST00000395837 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
UBB-202ENST00000395837 TNNQ9UQP3 1299 aa12.04□□□□□ -0.48
UBB-202ENST00000395837 PNMA6EA0A0J9YXQ4 647 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 USP17L5A8MUK1 530 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 TBC1D12O60347 775 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 GDF11O95390 407 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 BAG3O95817 575 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 UQCRFS1P1P0C7P4 283 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 CAP2P40123 477 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 MCAMP43121 646 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 GCLCP48506 637 aaPredicted RBP12.03□□□□□ -0.48
UBB-202ENST00000395837 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 IRF5Q13568 498 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 FAM110CQ1W6H9 321 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 NECAB2Q7Z6G3 386 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
UBB-202ENST00000395837 TGFBRAP1Q8WUH2 860 aa12.03□□□□□ -0.48
UBB-202ENST00000395837 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBB-202ENST00000395837 ASCC2Q9H1I8 757 aaPredicted RBP12.03□□□□□ -0.48
UBB-202ENST00000395837 SAP30BPQ9UHR5 308 aaKnown RBP12.03□□□□□ -0.48
UBB-202ENST00000395837 CEP290O15078 2479 aa12.02□□□□□ -0.48
UBB-202ENST00000395837 PEX10O60683 326 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 BCAR3O75815 825 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 HMGCRP04035 888 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 TRIM27P14373 513 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 CYP2B6P20813 491 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 ARID4AP29374 1257 aaPredicted RBP12.02□□□□□ -0.49
UBB-202ENST00000395837 RRP1BQ14684 758 aaKnown RBP12.02□□□□□ -0.49
UBB-202ENST00000395837 CCDC158Q5M9N0 1113 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 UBE2Q1Q7Z7E8 422 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 HMX1Q9NP08 348 aaPredicted RBP12.02□□□□□ -0.49
UBB-202ENST00000395837 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 STAP2Q9UGK3 403 aa12.02□□□□□ -0.49
UBB-202ENST00000395837 ZMYND8Q9ULU4 1186 aaPredicted RBP12.02□□□□□ -0.49
UBB-202ENST00000395837 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
UBB-202ENST00000395837 TRIM32Q13049 653 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 MTX1Q13505 466 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
UBB-202ENST00000395837 ATF7IPQ6VMQ6 1270 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 ARHGAP45Q92619 1136 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 DBNDD2Q9BQY9 259 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 PAGR1Q9BTK6 254 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 TBC1D2Q9BYX2 928 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 BCL11AQ9H165 835 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
UBB-202ENST00000395837 PAK6Q9NQU5 681 aaPredicted RBP12.01□□□□□ -0.49
UBB-202ENST00000395837 HERC5Q9UII4 1024 aaKnown RBP12.01□□□□□ -0.49
UBB-202ENST00000395837 PHIPQ8WWQ0 1821 aa12□□□□□ -0.49
UBB-202ENST00000395837 PTPRFP10586 1907 aa12□□□□□ -0.49
UBB-202ENST00000395837 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
UBB-202ENST00000395837 SURF6O75683 361 aaKnown RBP12□□□□□ -0.49
UBB-202ENST00000395837 HLA-DOAP06340 250 aa12□□□□□ -0.49
UBB-202ENST00000395837 ASNSP08243 561 aa12□□□□□ -0.49
UBB-202ENST00000395837 PLCG2P16885 1265 aa12□□□□□ -0.49
UBB-202ENST00000395837 SYN1P17600 705 aa12□□□□□ -0.49
UBB-202ENST00000395837 PDE3AQ14432 1141 aa12□□□□□ -0.49
UBB-202ENST00000395837 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
UBB-202ENST00000395837 TNNI3KQ59H18 835 aa12□□□□□ -0.49
UBB-202ENST00000395837 WDR78Q5VTH9 848 aa12□□□□□ -0.49
UBB-202ENST00000395837 FEZ1Q99689 392 aa12□□□□□ -0.49
UBB-202ENST00000395837 DHX36Q9H2U1 1008 aaKnown RBP12□□□□□ -0.49
UBB-202ENST00000395837 PALD1Q9ULE6 856 aa12□□□□□ -0.49
UBB-202ENST00000395837 FPGT-TNNI3KV9GXZ4 949 aa12□□□□□ -0.49
UBB-202ENST00000395837 FLT1P17948 1338 aa12□□□□□ -0.49
UBB-202ENST00000395837 CUL9Q8IWT3 2517 aa12□□□□□ -0.49
UBB-202ENST00000395837 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
UBB-202ENST00000395837 IDH1O75874 414 aaKnown RBP11.99□□□□□ -0.49
UBB-202ENST00000395837 USP5P45974 858 aa11.99□□□□□ -0.49
UBB-202ENST00000395837 BACE1P56817 501 aa11.99□□□□□ -0.49
UBB-202ENST00000395837 FTSJ3Q8IY81 847 aaKnown RBP11.99□□□□□ -0.49
UBB-202ENST00000395837 TMEM57Q8N5G2 664 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 493.1 ms