RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 SCN7AQ01118 1682 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 BTBD18B2RXH4 712 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 NPHP1O15259 732 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 ATP2B1P20020 1258 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 E4F1Q66K89 784 aaPredicted RBP15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 NYAP1Q6ZVC0 841 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 CCAR2Q8N163 923 aaKnown RBP15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 CCDC112Q8NEF3 446 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 CDC5LQ99459 802 aaKnown RBP15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 ZNF215Q9UL58 517 aaPredicted RBP15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 THSD7AQ9UPZ6 1657 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 hCG_1642624A0A1W2PR95 340 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 GSG1L2A8MUP6 293 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 TMEM232C9JQI7 657 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 IARSP41252 1262 aaKnown RBP15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 PDE4BQ07343 736 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 ZRSR1Q15695 479 aaKnown RBP15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 ANKRD18AQ8IVF6 992 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 GRAMD1CQ8IYS0 662 aa15.58■□□□□ 0.08
GTF2F1-201ENST00000394456 ATRNO75882 1429 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 ADGRA1Q86SQ6 560 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 METTL16Q86W50 562 aaKnown RBP15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 CELF1Q92879 486 aaKnown RBP15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 NAT10Q9H0A0 1025 aaKnown RBP15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 NAPBQ9H115 298 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 NHSQ6T4R5 1651 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 BMP6P22004 513 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 GYG1P46976 350 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 EVX2Q03828 476 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 NR5A1Q13285 461 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 PTPN14Q15678 1187 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 ZNF827Q17R98 1081 aa15.57■□□□□ 0.08
GTF2F1-201ENST00000394456 SPATA31A6Q5VVP1 1343 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 ZPR1O75312 459 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 RPS6KA4O75676 772 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 TOB1P50616 345 aaPredicted RBP15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 MAP3K12Q12852 859 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 OXER1Q8TDS5 423 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 NARFQ9UHQ1 456 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 HPSEQ9Y251 543 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 FAM205CA6NFA0 338 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 FANCCQ00597 558 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 SDR42E1Q8WUS8 393 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 SHISA4Q96DD7 197 aa15.56■□□□□ 0.08
GTF2F1-201ENST00000394456 TAF1LQ8IZX4 1826 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 CYP2D7A0A087X1C5 515 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 PRR29P0C7W0 189 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 USP49Q70CQ1 688 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 NBPF5PQ86XG9 351 aaPredicted RBP15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 GJD4Q96KN9 370 aaPredicted RBP15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 SETDB2Q96T68 719 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 SLC12A7Q9Y666 1083 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 SBF2Q86WG5 1849 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 PATL2C9JE40 543 aaKnown RBP15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 SF3B3Q15393 1217 aaKnown RBP15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 RTCBQ9Y3I0 505 aaKnown RBP15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 CHD4Q14839 1912 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 AFF2P51816 1311 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 WDR19Q8NEZ3 1342 aa15.55■□□□□ 0.08
GTF2F1-201ENST00000394456 ARHGEF1Q92888 912 aaKnown RBP15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 OSBPL5Q9H0X9 879 aaPredicted RBP15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 LRP2BPQ9P2M1 347 aa15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 ABCF2Q9UG63 623 aa15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 PCDHA5Q9Y5H7 936 aa15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 SLC4A4Q9Y6R1 1079 aa15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 RC3H1Q5TC82 1133 aaKnown RBP15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 RESP18Q5W5W9 173 aa15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 NUP133Q8WUM0 1156 aa15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 PRDM4Q9UKN5 801 aa15.54■□□□□ 0.08
GTF2F1-201ENST00000394456 HSPA1LP34931 641 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 TDO2P48775 406 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 PDILTQ8N807 584 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 PPP1R13BQ96KQ4 1090 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 FANCLQ9NW38 375 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 MINPP1Q9UNW1 487 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 PCDHB6Q9Y5E3 794 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 ZSCAN20P17040 1043 aaPredicted RBP15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 AKNAD1Q5T1N1 836 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 SYT10Q6XYQ8 523 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 SGMS1Q86VZ5 419 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 DIS3L2Q8IYB7 885 aaKnown RBP15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 TRMT44Q8IYL2 757 aaKnown RBP15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 BSDC1Q9NW68 430 aaPredicted RBP15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 TUBE1Q9UJT0 475 aa15.53■□□□□ 0.08
GTF2F1-201ENST00000394456 MINDY4BA8MYZ0 360 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 FANCGO15287 622 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 KLRK1P26718 216 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 SSRP1Q08945 709 aaKnown RBP15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 NOM1Q5C9Z4 860 aaKnown RBP15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 TMEM87BQ96K49 555 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 INTS13Q9NVM9 706 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 KCNH3Q9ULD8 1083 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 PAXBP1Q9Y5B6 917 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 ECM29Q5VYK3 1845 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 WNT7AO00755 349 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 CASP1P29466 404 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 ELF2Q15723 593 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 MFSD6Q6ZSS7 791 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms