RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 VTI1AQ96AJ9 217 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 SEC62Q99442 399 aaKnown RBP7.02□□□□□ -1.29
CASC3-202ENST00000394114 MPHOSPH8Q99549 860 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 UPF3BQ9BZI7 483 aaKnown RBP7.02□□□□□ -1.29
CASC3-202ENST00000394114 CASZ1Q86V15 1759 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 C4AP0C0L4 1744 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 SCN7AQ01118 1682 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 PARNO95453 639 aaKnown RBP7.02□□□□□ -1.29
CASC3-202ENST00000394114 NPR3P17342 541 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 IBSPP21815 317 aaPredicted RBP7.02□□□□□ -1.29
CASC3-202ENST00000394114 DAB2P98082 770 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 SCARF1Q14162 830 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 CCDC152Q4G0S7 254 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 TTC39AQ5SRH9 613 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 PPP1R18Q6NYC8 613 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 RETREG3Q86VR2 466 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 LSG1Q9H089 658 aaKnown RBP7.02□□□□□ -1.29
CASC3-202ENST00000394114 OSBPL2Q9H1P3 480 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 ANTXR1Q9H6X2 564 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 GPR108Q9NPR9 543 aa7.02□□□□□ -1.29
CASC3-202ENST00000394114 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.02□□□□□ -1.29
CASC3-202ENST00000394114 HSP90AA1P07900 732 aaKnown RBP7.01□□□□□ -1.29
CASC3-202ENST00000394114 MCCP23508 829 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 NEK4P51957 841 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 RABEP1Q15276 862 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 CCDC129Q6ZRS4 1044 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 HAUS7Q99871 368 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 PAG1Q9NWQ8 432 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 AKAP2Q9Y2D5 859 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 RAD50Q92878 1312 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 WTIPA6NIX2 430 aaPredicted RBP7.01□□□□□ -1.29
CASC3-202ENST00000394114 PDE8BO95263 885 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 HSD3B2P26439 372 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 KCNJ4P48050 445 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 MCCD1P59942 119 aaPredicted RBP7.01□□□□□ -1.29
CASC3-202ENST00000394114 FUT2Q10981 343 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 TXNRD1Q16881 649 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 CCDC158Q5M9N0 1113 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 ZNF589Q86UQ0 364 aaPredicted RBP7.01□□□□□ -1.29
CASC3-202ENST00000394114 RUFY2Q8WXA3 655 aa7.01□□□□□ -1.29
CASC3-202ENST00000394114 SECISBP2LQ93073 1101 aaKnown RBP7.01□□□□□ -1.29
CASC3-202ENST00000394114 DUSP9Q99956 384 aaKnown RBP7.01□□□□□ -1.29
CASC3-202ENST00000394114 ATMINO43313 823 aaPredicted RBP7□□□□□ -1.29
CASC3-202ENST00000394114 APBA3O96018 575 aa7□□□□□ -1.29
CASC3-202ENST00000394114 LDHBP07195 334 aaKnown RBP7□□□□□ -1.29
CASC3-202ENST00000394114 IGHMBP2P38935 993 aaKnown RBP7□□□□□ -1.29
CASC3-202ENST00000394114 DSC3Q14574 896 aa7□□□□□ -1.29
CASC3-202ENST00000394114 CAPN12Q6ZSI9 719 aa7□□□□□ -1.29
CASC3-202ENST00000394114 VGLL2Q8N8G2 317 aa7□□□□□ -1.29
CASC3-202ENST00000394114 UBR3Q6ZT12 1888 aa7□□□□□ -1.29
CASC3-202ENST00000394114 MYO5AQ9Y4I1 1855 aaKnown RBP7□□□□□ -1.29
CASC3-202ENST00000394114 LAMB2P55268 1798 aa7□□□□□ -1.29
CASC3-202ENST00000394114 CPA1P15085 419 aa7□□□□□ -1.29
CASC3-202ENST00000394114 ZAP70P43403 619 aa7□□□□□ -1.29
CASC3-202ENST00000394114 PHKA1P46020 1223 aa7□□□□□ -1.29
CASC3-202ENST00000394114 ANAPC15P60006 121 aa7□□□□□ -1.29
CASC3-202ENST00000394114 NFIXQ14938 502 aa7□□□□□ -1.29
CASC3-202ENST00000394114 PRPF40BQ6NWY9 871 aaKnown RBP7□□□□□ -1.29
CASC3-202ENST00000394114 SLC51AQ86UW1 340 aa7□□□□□ -1.29
CASC3-202ENST00000394114 PACS2Q86VP3 889 aa7□□□□□ -1.29
CASC3-202ENST00000394114 EXOC8Q8IYI6 725 aa7□□□□□ -1.29
CASC3-202ENST00000394114 CELF1Q92879 486 aaKnown RBP7□□□□□ -1.29
CASC3-202ENST00000394114 SNX21Q969T3 373 aa7□□□□□ -1.29
CASC3-202ENST00000394114 MKNK1Q9BUB5 465 aa7□□□□□ -1.29
CASC3-202ENST00000394114 RNF19AQ9NV58 838 aa7□□□□□ -1.29
CASC3-202ENST00000394114 CCDC171Q6TFL3 1326 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 K7ELQ4 463 aaPredicted RBP6.99□□□□□ -1.29
CASC3-202ENST00000394114 HIP1O00291 1037 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 HSPA4P34932 840 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 ARID5AQ03989 594 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 TPTE2Q6XPS3 522 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 KBTBD3Q8NAB2 608 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 HELQQ8TDG4 1101 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 DMGDHQ9UI17 866 aaKnown RBP6.99□□□□□ -1.29
CASC3-202ENST00000394114 SMAPO00193 183 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 ST18O60284 1047 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 MCAMP43121 646 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 CHRNDQ07001 517 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 PUM3Q15397 648 aaKnown RBP6.99□□□□□ -1.29
CASC3-202ENST00000394114 ASTLQ6HA08 431 aaPredicted RBP6.99□□□□□ -1.29
CASC3-202ENST00000394114 DEFB132Q7Z7B7 95 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 RBM8AQ9Y5S9 174 aaKnown RBP6.99□□□□□ -1.29
CASC3-202ENST00000394114 SNX14Q9Y5W7 946 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 AKAP11Q9UKA4 1901 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 MROH5Q6ZUA9 1318 aa6.99□□□□□ -1.29
CASC3-202ENST00000394114 WEE1P30291 646 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 ZNF827Q17R98 1081 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 TSGA10IPQ3SY00 556 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 SLC27A3Q5K4L6 730 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 CCDC102BQ68D86 513 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 ANKRD18AQ8IVF6 992 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 NLRP3Q96P20 1036 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 CDC5LQ99459 802 aaKnown RBP6.98□□□□□ -1.29
CASC3-202ENST00000394114 NYXQ9GZU5 481 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 TFCP2L1Q9NZI6 479 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 VTI1BQ9UEU0 232 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 TAF6LQ9Y6J9 622 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 LRP5O75197 1615 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 SFI1A8K8P3 1242 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms