RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TNNQ9UQP3 1299 aa21.5■■□□□ 1.03
SNRPA1-202ENST00000394082 BAG3O95817 575 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 SLURP2P0DP57 97 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 CCL5P13501 91 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 CAP2P40123 477 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 PPP4CP60510 307 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 ATP8B2P98198 1209 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 TNNI3KQ59H18 835 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 CCDC158Q5M9N0 1113 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 TMEM57Q8N5G2 664 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 ZNF280CQ8ND82 737 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 PI4KBQ9UBF8 816 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 FPGT-TNNI3KV9GXZ4 949 aa21.49■■□□□ 1.03
SNRPA1-202ENST00000394082 FAM110CQ1W6H9 321 aa21.48■■□□□ 1.03
SNRPA1-202ENST00000394082 TEX11Q8IYF3 940 aa21.48■■□□□ 1.03
SNRPA1-202ENST00000394082 NOL10Q9BSC4 688 aaKnown RBP21.48■■□□□ 1.03
SNRPA1-202ENST00000394082 LOC285556D6RIA3 1793 aa21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 GCLCP48506 637 aaPredicted RBP21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 FLT3LGP49771 235 aa21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 PABPC4Q13310 644 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 SH3D19Q5HYK7 790 aa21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 METTL16Q86W50 562 aaKnown RBP21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 RNF208Q9H0X6 261 aa21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 GABRQQ9UN88 632 aa21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 NOP58Q9Y2X3 529 aaKnown RBP21.47■■□□□ 1.03
SNRPA1-202ENST00000394082 MAST2Q6P0Q8 1798 aa21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 USP17L5A8MUK1 530 aa21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 TNPO2O14787 897 aaKnown RBP21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 ADCY3O60266 1144 aa21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 ECM2O94769 699 aaPredicted RBP21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 SPP2Q13103 211 aa21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 TTC39AQ5SRH9 613 aa21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 NAA16Q6N069 864 aaPredicted RBP21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 AS3MTQ9HBK9 375 aa21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 GINM1Q9NU53 330 aa21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 BIN2Q9UBW5 565 aaPredicted RBP21.46■■□□□ 1.03
SNRPA1-202ENST00000394082 TREML2Q5T2D2 321 aa21.45■■□□□ 1.02
SNRPA1-202ENST00000394082 FOXP4Q8IVH2 680 aaPredicted RBP21.45■■□□□ 1.02
SNRPA1-202ENST00000394082 SH3RF3Q8TEJ3 882 aaPredicted RBP21.45■■□□□ 1.02
SNRPA1-202ENST00000394082 WDR18Q9BV38 432 aa21.45■■□□□ 1.02
SNRPA1-202ENST00000394082 ATAD5Q96QE3 1844 aa21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 FAM196BA6NMK8 535 aa21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 CYP2E1P05181 493 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 TMED8Q6PL24 325 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 CERS3Q8IU89 383 aa21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 ANKRD13CQ8N6S4 541 aa21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 U2AF1L4Q8WU68 220 aaKnown RBP21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 COA7Q96BR5 231 aa21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 DBNDD2Q9BQY9 259 aa21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 HTATIP2Q9BUP3 242 aa21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-202ENST00000394082 CEP290O15078 2479 aa21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 H0YGN5 161 aa21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 ZBTB7BO15156 539 aaPredicted RBP21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 SURF6O75683 361 aaKnown RBP21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 SGPL1O95470 568 aa21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 ASNSP08243 561 aa21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 OS9Q13438 667 aaPredicted RBP21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 RRP1BQ14684 758 aaKnown RBP21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 CCDC84Q86UT8 332 aaPredicted RBP21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 AATFQ9NY61 560 aaKnown RBP eCLIP21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 COLQQ9Y215 455 aaPredicted RBP21.43■■□□□ 1.02
SNRPA1-202ENST00000394082 FXR1P51114 621 aaKnown RBP eCLIP21.42■■□□□ 1.02
SNRPA1-202ENST00000394082 FOCADQ5VW36 1801 aa21.42■■□□□ 1.02
SNRPA1-202ENST00000394082 SNRKQ9NRH2 765 aa21.42■■□□□ 1.02
SNRPA1-202ENST00000394082 FLT1P17948 1338 aa21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 INHAP05111 366 aa21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 HOXA7P31268 230 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 HMGCS2P54868 508 aa21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 TGFBRAP1Q8WUH2 860 aa21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 UNC93B1Q9H1C4 597 aa21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 ASCC2Q9H1I8 757 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 PAK6Q9NQU5 681 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 SIPA1L1O43166 1804 aa21.41■■□□□ 1.02
SNRPA1-202ENST00000394082 RANBP2P49792 3224 aaKnown RBP21.4■■□□□ 1.02
SNRPA1-202ENST00000394082 C19orf81C9J6K1 198 aa21.4■■□□□ 1.02
SNRPA1-202ENST00000394082 BACE1P56817 501 aa21.4■■□□□ 1.02
SNRPA1-202ENST00000394082 ADGRA1Q86SQ6 560 aa21.4■■□□□ 1.02
SNRPA1-202ENST00000394082 MORF4L1Q9UBU8 362 aa21.4■■□□□ 1.02
SNRPA1-202ENST00000394082 DBNLQ9UJU6 430 aaKnown RBP21.4■■□□□ 1.02
SNRPA1-202ENST00000394082 ELNP15502 786 aa21.39■■□□□ 1.01
SNRPA1-202ENST00000394082 ZAP70P43403 619 aa21.39■■□□□ 1.01
SNRPA1-202ENST00000394082 DPF3Q92784 378 aa21.39■■□□□ 1.01
SNRPA1-202ENST00000394082 CRISPLD2Q9H0B8 497 aa21.39■■□□□ 1.01
SNRPA1-202ENST00000394082 DNAJC18Q9H819 358 aa21.39■■□□□ 1.01
SNRPA1-202ENST00000394082 CDK5RAP2Q96SN8 1893 aa21.39■■□□□ 1.01
SNRPA1-202ENST00000394082 DOCK3Q8IZD9 2030 aa21.38■■□□□ 1.01
SNRPA1-202ENST00000394082 FARP2O94887 1054 aaPredicted RBP21.38■■□□□ 1.01
SNRPA1-202ENST00000394082 MAPKAPK5Q8IW41 473 aa21.37■■□□□ 1.01
SNRPA1-202ENST00000394082 ITPRIPQ8IWB1 547 aa21.37■■□□□ 1.01
SNRPA1-202ENST00000394082 CRACR2BQ8N4Y2 399 aaPredicted RBP21.37■■□□□ 1.01
SNRPA1-202ENST00000394082 EAF2Q96CJ1 260 aaPredicted RBP21.37■■□□□ 1.01
SNRPA1-202ENST00000394082 PIH1D3Q9NQM4 214 aaKnown RBP21.37■■□□□ 1.01
SNRPA1-202ENST00000394082 TMOD4Q9NZQ9 345 aa21.37■■□□□ 1.01
SNRPA1-202ENST00000394082 GJD2Q9UKL4 321 aa21.37■■□□□ 1.01
SNRPA1-202ENST00000394082 NR2E3Q9Y5X4 410 aa21.37■■□□□ 1.01
SNRPA1-202ENST00000394082 USP17L10C9JJH3 530 aa21.36■■□□□ 1.01
SNRPA1-202ENST00000394082 HLA-DOAP06340 250 aa21.36■■□□□ 1.01
SNRPA1-202ENST00000394082 RLBP1P12271 317 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms