RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.36
CASP3-202ENST00000393585 MMP10P09238 476 aa12.77□□□□□ -0.37
CASP3-202ENST00000393585 FAM47AQ5JRC9 791 aa12.77□□□□□ -0.37
CASP3-202ENST00000393585 MYSM1Q5VVJ2 828 aa12.77□□□□□ -0.37
CASP3-202ENST00000393585 CKAP2LQ8IYA6 745 aa12.77□□□□□ -0.37
CASP3-202ENST00000393585 ZSCAN10Q96SZ4 725 aaPredicted RBP12.77□□□□□ -0.37
CASP3-202ENST00000393585 FUCA2Q9BTY2 467 aa12.77□□□□□ -0.37
CASP3-202ENST00000393585 CLIC4Q9Y696 253 aa12.77□□□□□ -0.37
CASP3-202ENST00000393585 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 NMT2O60551 498 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 IFNAR1P17181 557 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 USP5P45974 858 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 SSRP1Q08945 709 aaKnown RBP12.76□□□□□ -0.37
CASP3-202ENST00000393585 TMTC2Q8N394 836 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 ARPP21Q9UBL0 812 aaPredicted RBP12.76□□□□□ -0.37
CASP3-202ENST00000393585 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
CASP3-202ENST00000393585 FGRP09769 529 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 IL1R1P14778 569 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 ME1P48163 572 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
CASP3-202ENST00000393585 IQCA1Q86XH1 822 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 FANCBQ8NB91 859 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 PPP1R9BQ96SB3 815 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 NID2Q14112 1375 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 LAMB1P07942 1786 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
CASP3-202ENST00000393585 FMNL1O95466 1100 aaPredicted RBP12.75□□□□□ -0.37
CASP3-202ENST00000393585 SRGNP10124 158 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 MFSD14BQ5SR56 506 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 ATL3Q6DD88 541 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 BRAPQ7Z569 592 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 TGFBRAP1Q8WUH2 860 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 TNMDQ9H2S6 317 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 GOLPH3LQ9H4A5 285 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 DDX19AQ9NUU7 478 aaKnown RBP12.75□□□□□ -0.37
CASP3-202ENST00000393585 MAP3K11Q16584 847 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 CCAR1Q8IX12 1150 aaKnown RBP12.75□□□□□ -0.37
CASP3-202ENST00000393585 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
CASP3-202ENST00000393585 RTEL1Q9NZ71 1219 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
CASP3-202ENST00000393585 MROH7-TTC4A0A0A0MT08 1334 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 STK36Q9NRP7 1315 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 GSTO1P78417 241 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 GNL2Q13823 731 aaKnown RBP12.75□□□□□ -0.37
CASP3-202ENST00000393585 TRIM29Q14134 588 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 STK38Q15208 465 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 SBK1Q52WX2 424 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 LINC00301Q8NCQ3 95 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 DYNLL2Q96FJ2 89 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 RTFDC1Q9BY42 306 aaPredicted RBP12.75□□□□□ -0.37
CASP3-202ENST00000393585 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
CASP3-202ENST00000393585 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 BAG3O95817 575 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
CASP3-202ENST00000393585 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 TRIM22Q8IYM9 498 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 CLSTN2Q9H4D0 955 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 KCNJ14Q9UNX9 436 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 ATP6V0A2Q9Y487 856 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
CASP3-202ENST00000393585 TSPY2A6NKD2 308 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 ORC4O43929 436 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 PCP11498 1178 aaKnown RBP12.74□□□□□ -0.37
CASP3-202ENST00000393585 BTDP43251 543 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 GTF2IP78347 998 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 PDE4BQ07343 736 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
CASP3-202ENST00000393585 CRACR2BQ8N4Y2 399 aaPredicted RBP12.74□□□□□ -0.37
CASP3-202ENST00000393585 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
CASP3-202ENST00000393585 NOL10Q9BSC4 688 aaKnown RBP12.74□□□□□ -0.37
CASP3-202ENST00000393585 CCDC196A0A1B0GTZ2 297 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 hCG_1642624A0A1W2PR95 340 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 LDHCP07864 332 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
CASP3-202ENST00000393585 NPR1P16066 1061 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 SF3A1Q15459 793 aaKnown RBP12.73□□□□□ -0.37
CASP3-202ENST00000393585 C12orf60Q5U649 245 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 RRAGDQ9NQL2 400 aaPredicted RBP12.73□□□□□ -0.37
CASP3-202ENST00000393585 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 SAP30BPQ9UHR5 308 aaKnown RBP12.73□□□□□ -0.37
CASP3-202ENST00000393585 NRXN2Q9P2S2 1712 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 COL11A2P13942 1736 aaPredicted RBP12.73□□□□□ -0.37
CASP3-202ENST00000393585 PLEKHA8P1O95397 391 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 CCDC192P0DO97 292 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 TROAPQ12815 778 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 CATIPQ7Z7H3 387 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 FSIP1Q8NA03 581 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 PDLIM2Q96JY6 352 aa12.73□□□□□ -0.37
CASP3-202ENST00000393585 SPTLC2O15270 562 aa12.72□□□□□ -0.37
CASP3-202ENST00000393585 DEXIO95424 95 aa12.72□□□□□ -0.37
CASP3-202ENST00000393585 RCAN1P53805 252 aa12.72□□□□□ -0.37
CASP3-202ENST00000393585 PPP4CP60510 307 aa12.72□□□□□ -0.37
CASP3-202ENST00000393585 SNW1Q13573 536 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms