RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 PTPRAP18433 802 aa10.85□□□□□ -0.67
TRBV27-201ENST00000390399 TAF1CQ15572 869 aaPredicted RBP10.85□□□□□ -0.67
TRBV27-201ENST00000390399 FAM43AQ8N2R8 423 aa10.85□□□□□ -0.67
TRBV27-201ENST00000390399 TRIM34Q9BYJ4 488 aa10.85□□□□□ -0.67
TRBV27-201ENST00000390399 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRBV27-201ENST00000390399 ECHDC1Q9NTX5 307 aa10.85□□□□□ -0.67
TRBV27-201ENST00000390399 PI4KBQ9UBF8 816 aa10.85□□□□□ -0.67
TRBV27-201ENST00000390399 SAP30BPQ9UHR5 308 aaKnown RBP10.85□□□□□ -0.67
TRBV27-201ENST00000390399 KCNH4Q9UQ05 1017 aa10.85□□□□□ -0.67
TRBV27-201ENST00000390399 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
TRBV27-201ENST00000390399 ATAD5Q96QE3 1844 aa10.84□□□□□ -0.67
TRBV27-201ENST00000390399 TCRBV5S4A2TA0A5A2 114 aa10.84□□□□□ -0.67
TRBV27-201ENST00000390399 SLC4A8Q2Y0W8 1093 aa10.84□□□□□ -0.67
TRBV27-201ENST00000390399 CRACR2BQ8N4Y2 399 aaPredicted RBP10.84□□□□□ -0.67
TRBV27-201ENST00000390399 RIOK1Q9BRS2 568 aaKnown RBP10.84□□□□□ -0.67
TRBV27-201ENST00000390399 ZFYVE28Q9HCC9 887 aa10.84□□□□□ -0.67
TRBV27-201ENST00000390399 ZCCHC17Q9NP64 241 aaKnown RBP10.84□□□□□ -0.67
TRBV27-201ENST00000390399 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.84□□□□□ -0.67
TRBV27-201ENST00000390399 PALD1Q9ULE6 856 aa10.84□□□□□ -0.67
TRBV27-201ENST00000390399 ZHX2Q9Y6X8 837 aa10.84□□□□□ -0.67
TRBV27-201ENST00000390399 NAV1Q8NEY1 1877 aa10.84□□□□□ -0.67
TRBV27-201ENST00000390399 DDX60LQ5H9U9 1706 aaKnown RBP10.84□□□□□ -0.67
TRBV27-201ENST00000390399 CXCL11O14625 94 aa10.83□□□□□ -0.68
TRBV27-201ENST00000390399 ADD2P35612 726 aa10.83□□□□□ -0.68
TRBV27-201ENST00000390399 TSHZ3Q63HK5 1081 aa10.83□□□□□ -0.68
TRBV27-201ENST00000390399 ANKRD23Q86SG2 305 aa10.83□□□□□ -0.68
TRBV27-201ENST00000390399 CRNKL1Q9BZJ0 848 aaKnown RBP10.83□□□□□ -0.68
TRBV27-201ENST00000390399 MYH1P12882 1939 aa10.83□□□□□ -0.68
TRBV27-201ENST00000390399 MYH7P12883 1935 aa10.83□□□□□ -0.68
TRBV27-201ENST00000390399 PHIPQ8WWQ0 1821 aa10.83□□□□□ -0.68
TRBV27-201ENST00000390399 A0A0G2JLL6 359 aaPredicted RBP10.82□□□□□ -0.68
TRBV27-201ENST00000390399 TRIM75PA6NK02 468 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 CCDC85CA6NKD9 419 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 PDHXO00330 501 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 CAP2P40123 477 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 HDAC1Q13547 482 aaPredicted RBP10.82□□□□□ -0.68
TRBV27-201ENST00000390399 AAMPQ13685 434 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 MOGSQ13724 837 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 PKN2Q16513 984 aaKnown RBP10.82□□□□□ -0.68
TRBV27-201ENST00000390399 ZSCAN25Q6NSZ9 544 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 PRRT2Q7Z6L0 340 aaPredicted RBP10.82□□□□□ -0.68
TRBV27-201ENST00000390399 CCDC84Q86UT8 332 aaPredicted RBP10.82□□□□□ -0.68
TRBV27-201ENST00000390399 FOXP4Q8IVH2 680 aaPredicted RBP10.82□□□□□ -0.68
TRBV27-201ENST00000390399 LCORLQ8N3X6 602 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 ERO1AQ96HE7 468 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 DNAJC18Q9H819 358 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
TRBV27-201ENST00000390399 AFG3L2Q9Y4W6 797 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 TTC41PQ6P2S7 1318 aa10.82□□□□□ -0.68
TRBV27-201ENST00000390399 MBD4O95243 580 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 SP3Q02447 781 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 RRP1BQ14684 758 aaKnown RBP10.81□□□□□ -0.68
TRBV27-201ENST00000390399 UBE3CQ15386 1083 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 SLFNL1Q499Z3 407 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 GADL1Q6ZQY3 521 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 FASTKD5Q7L8L6 764 aaKnown RBP10.81□□□□□ -0.68
TRBV27-201ENST00000390399 TTC6Q86TZ1 520 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 METTL16Q86W50 562 aaKnown RBP10.81□□□□□ -0.68
TRBV27-201ENST00000390399 CD99L2Q8TCZ2 262 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 GCC1Q96CN9 775 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 TBC1D2Q9BYX2 928 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 EHD4Q9H223 541 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 ARMT1Q9H993 441 aa10.81□□□□□ -0.68
TRBV27-201ENST00000390399 PTPRFP10586 1907 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 USP17L5A8MUK1 530 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 ERC2O15083 957 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 TLR2O60603 784 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 GDF11O95390 407 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 CHGBP05060 677 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 POLR3DP05423 398 aaPredicted RBP10.8□□□□□ -0.68
TRBV27-201ENST00000390399 ANKRD45Q5TZF3 282 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 GPAT2Q6NUI2 795 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 ZNF280CQ8ND82 737 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 EXOC6Q8TAG9 804 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 OTUD7AQ8TE49 926 aaPredicted RBP10.8□□□□□ -0.68
TRBV27-201ENST00000390399 SDR42E1Q8WUS8 393 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 PARK7Q99497 189 aaKnown RBP10.8□□□□□ -0.68
TRBV27-201ENST00000390399 AS3MTQ9HBK9 375 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 MCM9Q9NXL9 1143 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 SERPINB13Q9UIV8 391 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 TRIM17Q9Y577 477 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 SUPT16HQ9Y5B9 1047 aaKnown RBP10.8□□□□□ -0.68
TRBV27-201ENST00000390399 LOC285556D6RIA3 1793 aa10.8□□□□□ -0.68
TRBV27-201ENST00000390399 GLRX3O76003 335 aaKnown RBP10.79□□□□□ -0.68
TRBV27-201ENST00000390399 ASNSP08243 561 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 MX1P20591 662 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 SPP2Q13103 211 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 FBXO46Q6PJ61 603 aaPredicted RBP10.79□□□□□ -0.68
TRBV27-201ENST00000390399 OTOP1Q7RTM1 612 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 KBTBD3Q8NAB2 608 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 PI4K2BQ8TCG2 481 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 DCP1AQ9NPI6 582 aaPredicted RBP10.79□□□□□ -0.68
TRBV27-201ENST00000390399 GINM1Q9NU53 330 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 ZBTB21Q9ULJ3 1066 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 HPS5Q9UPZ3 1129 aa10.79□□□□□ -0.68
TRBV27-201ENST00000390399 PRKAB2O43741 272 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 PLCD1P51178 756 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 HMGCS2P54868 508 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 JAG1P78504 1218 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 KIF22Q14807 665 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms