RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 MYCBPQ99417 103 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF3-201ENST00000389212 CYP2D7A0A087X1C5 515 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 ERVV-1B6SEH8 477 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 POLR3GO15318 223 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 GYG1P46976 350 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 GOLGA8DPQ0D2H9 430 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 PTPAQ15257 358 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 CDKL5O76039 1030 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 SSRP1Q08945 709 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 NR5A1Q13285 461 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 AKNAD1Q5T1N1 836 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 MYH3P11055 1940 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 C4AP0C0L4 1744 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 C4BP0C0L5 1744 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 NLRP12P59046 1061 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 CHRNDQ07001 517 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 GEMIN8Q9NWZ8 242 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-201ENST00000389212 PRDM1O75626 825 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 NCAPHQ15003 741 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 CEP135Q66GS9 1140 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 CCDC24Q8N4L8 307 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 ATRNO75882 1429 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 WDR19Q8NEZ3 1342 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 CYP7A1P22680 504 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 RAD51AP2Q09MP3 1159 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 PDILTQ8N807 584 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 DPF2Q92785 391 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 KCNQ2O43526 872 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 EVX2Q03828 476 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 SLC20A2Q08357 652 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 ARMCX5Q6P1M9 558 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 DIS3L2Q8IYB7 885 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 GRAMD1CQ8IYS0 662 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 RAI14Q9P0K7 980 aa13.44□□□□□ -0.26
RAPGEF3-201ENST00000389212 STRCQ7RTU9 1775 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 SIK1P57059 783 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 WTAPQ15007 396 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 E2F4Q16254 413 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 RTN1Q16799 776 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 ZNF827Q17R98 1081 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 SLC4A8Q2Y0W8 1093 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 FAM43BQ6ZT52 329 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 FOXP4Q8IVH2 680 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 SGMS1Q86VZ5 419 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 METTL16Q86W50 562 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 NOL10Q9BSC4 688 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 JAG2Q9Y219 1238 aa13.43□□□□□ -0.26
RAPGEF3-201ENST00000389212 COL4A1P02462 1669 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 TRIM66O15016 1216 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 DYNLL1P63167 89 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 NCBP1Q09161 790 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 DDB1Q16531 1140 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 CCDC152Q4G0S7 254 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 TOB1P50616 345 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 FANCCQ00597 558 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 CNNM3Q8NE01 707 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 NEK11Q8NG66 645 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 HSD3B7Q9H2F3 369 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 EFCC1Q9HA90 598 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 KCNH3Q9ULD8 1083 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 HPSEQ9Y251 543 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 PCDHB6Q9Y5E3 794 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 PCDHA5Q9Y5H7 936 aa13.42□□□□□ -0.26
RAPGEF3-201ENST00000389212 BAZ2BQ9UIF8 2168 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 KDM4FA0A1W2PPD8 638 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 FMNL1O95466 1100 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 NTSR2O95665 410 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 RBM6P78332 1123 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 PDE4BQ07343 736 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 ALX1Q15699 326 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 USP49Q70CQ1 688 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 CCAR2Q8N163 923 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 NACAP1Q9BZK3 213 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 TMEM232C9JQI7 657 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 LIFRP42702 1097 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms