RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 CCDC105Q8IYK2 499 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 ZNF594Q96JF6 807 aaPredicted RBP17.29■□□□□ 0.36
ALK-201ENST00000389048 MSH6P52701 1360 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 A0A1B0GUA9 196 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 ZNF853P0CG23 659 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 RPL13P26373 211 aaKnown RBP17.28■□□□□ 0.36
ALK-201ENST00000389048 CHMLP26374 656 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 ERO1AQ96HE7 468 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 ADKP55263 362 aaKnown RBP17.28■□□□□ 0.36
ALK-201ENST00000389048 TIMM10P62072 90 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
ALK-201ENST00000389048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.28■□□□□ 0.36
ALK-201ENST00000389048 HMGB2P26583 209 aaKnown RBP17.28■□□□□ 0.36
ALK-201ENST00000389048 UBL4BQ8N7F7 174 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 KCNH3Q9ULD8 1083 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 SND1Q7KZF4 910 aaKnown RBP eCLIP17.28■□□□□ 0.36
ALK-201ENST00000389048 ZC3H12CQ9C0D7 883 aaKnown RBP17.28■□□□□ 0.36
ALK-201ENST00000389048 CALUO43852 315 aaPredicted RBP17.28■□□□□ 0.36
ALK-201ENST00000389048 BAG2O95816 211 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 SNX21Q969T3 373 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 NOX5Q96PH1 765 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 KCNJ14Q9UNX9 436 aa17.28■□□□□ 0.36
ALK-201ENST00000389048 BRAPQ7Z569 592 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 PLEKHM2Q8IWE5 1019 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 IFT20Q8IY31 132 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 CMTR1Q8N1G2 835 aaKnown RBP17.27■□□□□ 0.36
ALK-201ENST00000389048 NACA2Q9H009 215 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 GCNT3O95395 438 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 SAT1P21673 171 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 COBLO75128 1261 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 STRN3Q13033 797 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 ERCC6LQ2NKX8 1250 aa17.27■□□□□ 0.36
ALK-201ENST00000389048 PNOCQ13519 176 aa17.27■□□□□ 0.35
ALK-201ENST00000389048 USP26Q9BXU7 913 aa17.27■□□□□ 0.35
ALK-201ENST00000389048 ACTN4O43707 911 aaKnown RBP17.27■□□□□ 0.35
ALK-201ENST00000389048 MYCT1Q8N699 235 aa17.27■□□□□ 0.35
ALK-201ENST00000389048 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 PAK1Q13153 545 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 LIN9Q5TKA1 542 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 DCLK2Q8N568 766 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
ALK-201ENST00000389048 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.26■□□□□ 0.35
ALK-201ENST00000389048 GIPC1O14908 333 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 SLC27A2O14975 620 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 VPS41P49754 854 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 IFRD2Q12894 506 aaPredicted RBP17.26■□□□□ 0.35
ALK-201ENST00000389048 NOP9Q86U38 636 aaKnown RBP17.26■□□□□ 0.35
ALK-201ENST00000389048 FAM227BQ96M60 508 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 SEPT10Q9P0V9 454 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 TCP10Q12799 353 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 DCUN1D2Q6PH85 259 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 RBM28Q9NW13 759 aaKnown RBP17.26■□□□□ 0.35
ALK-201ENST00000389048 ARHGAP42A6NI28 874 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 CETN3O15182 167 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 NELFBQ8WX92 580 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 CABS1Q96KC9 395 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 TPX2Q9ULW0 747 aaKnown RBP17.26■□□□□ 0.35
ALK-201ENST00000389048 TIAM1Q13009 1591 aa17.26■□□□□ 0.35
ALK-201ENST00000389048 I3L4J1 428 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 TAF5LO75529 589 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 GNAT2P19087 354 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 ANO1Q5XXA6 986 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 NLRC4Q9NPP4 1024 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 FAM207AQ9NSI2 230 aaPredicted RBP17.25■□□□□ 0.35
ALK-201ENST00000389048 DHX29Q7Z478 1369 aaKnown RBP17.25■□□□□ 0.35
ALK-201ENST00000389048 BUB1O43683 1085 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 IL1RL1Q01638 556 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 KIF22Q14807 665 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 USH1CQ9Y6N9 552 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 CNNM4Q6P4Q7 775 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 TEX11Q8IYF3 940 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 ABCB4P21439 1286 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 CSRNP2Q9H175 543 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 NOD1Q9Y239 953 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 TROQ12816 1431 aaPredicted RBP17.25■□□□□ 0.35
ALK-201ENST00000389048 ZNF75DP51815 510 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 RSPH3Q86UC2 560 aa17.25■□□□□ 0.35
ALK-201ENST00000389048 FOXD4Q12950 439 aaPredicted RBP17.24■□□□□ 0.35
ALK-201ENST00000389048 PPP2R5AQ15172 486 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 CPXCR1Q8N123 301 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 CCDC89Q8N998 374 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 FAM89AQ96GI7 184 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 OPHN1O60890 802 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 IDI1Q13907 227 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 LONRF2Q1L5Z9 754 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 BZW2Q9Y6E2 419 aaKnown RBP17.24■□□□□ 0.35
ALK-201ENST00000389048 CD19P15391 556 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 TSNAXIP1Q2TAA8 658 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 CTAGE3PQ8IX95 158 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 RNF10Q8N5U6 811 aaKnown RBP17.24■□□□□ 0.35
ALK-201ENST00000389048 MRPL44Q9H9J2 332 aaKnown RBP17.24■□□□□ 0.35
ALK-201ENST00000389048 SMTNP53814 917 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
ALK-201ENST00000389048 POGZQ7Z3K3 1410 aa17.23■□□□□ 0.35
ALK-201ENST00000389048 SMIM24O75264 130 aa17.23■□□□□ 0.35
ALK-201ENST00000389048 STK10O94804 968 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms