RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 PICALMQ13492 652 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 TNFAIP1Q13829 316 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 TOB2Q14106 344 aaPredicted RBP10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 SPDYE2Q495Y8 402 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 TMEM67Q5HYA8 995 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 PPP4R3BQ5MIZ7 849 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 DPY19L2Q6NUT2 758 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 FOXP4Q8IVH2 680 aaPredicted RBP10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 BRF1Q92994 677 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 TDRD3Q9H7E2 651 aaKnown RBP10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 RNF181Q9P0P0 153 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 PI4KBQ9UBF8 816 aa10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 SAP30BPQ9UHR5 308 aaKnown RBP10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 CNOT7Q9UIV1 285 aaKnown RBP10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 CIZ1Q9ULV3 898 aaPredicted RBP10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 ZNF646O15015 1829 aaPredicted RBP10.41□□□□□ -0.74
RNU1-28P-201ENST00000383861 CYP2D7A0A087X1C5 515 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 CCDC69A6NI79 296 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 TSPY2A6NKD2 308 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 RANBP6O60518 1105 aaKnown RBP10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 CYP2D6P10635 497 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 GMPSP49915 693 aaPredicted RBP10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 PLCD1P51178 756 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 RCAN1P53805 252 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 ANTXR2P58335 489 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 WTAPQ15007 396 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 PPP2R5BQ15173 497 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 NOL8Q76FK4 1167 aaKnown RBP10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 FAM83AQ86UY5 434 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 SGMS1Q86VZ5 419 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 MICALL2Q8IY33 904 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 FAM151AQ8WW52 585 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 ZBED3Q96IU2 234 aaPredicted RBP10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 TCP11L1Q9NUJ3 509 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 ZNF70Q9UC06 446 aaPredicted RBP10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 SERPINB13Q9UIV8 391 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 TPCN1Q9ULQ1 816 aa10.4□□□□□ -0.74
RNU1-28P-201ENST00000383861 ATRNL1Q5VV63 1379 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 SH2B2O14492 632 aaPredicted RBP10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 PFKFB2O60825 505 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 LMOD1P29536 600 aaPredicted RBP10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 CDK8P49336 464 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 GABPAQ06546 454 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 ME3Q16798 604 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 C9orf131Q5VYM1 1079 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 NFXL1Q6ZNB6 911 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 CYB5R4Q7L1T6 521 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 ZSCAN29Q8IWY8 852 aaPredicted RBP10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 CRACR2BQ8N4Y2 399 aaPredicted RBP10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 IGDCC4Q8TDY8 1250 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 CCDC17Q96LX7 622 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 TCEANC2Q96MN5 208 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 ZSCAN10Q96SZ4 725 aaPredicted RBP10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 LLPHQ9BRT6 129 aaKnown RBP10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 DDX4Q9NQI0 724 aaKnown RBP10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 FAM198AQ9UFP1 575 aa10.39□□□□□ -0.75
RNU1-28P-201ENST00000383861 NAV1Q8NEY1 1877 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 ZNF541Q9H0D2 1346 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 CCDC196A0A1B0GTZ2 297 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 DCAF8L1A6NGE4 600 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 WNT10BO00744 389 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 TSPY3P0CV98 308 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 TSPY8P0CW00 308 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 CALM1P0DP23 149 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 CALM2P0DP24 149 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 CALM3P0DP25 149 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 PDIA3P30101 505 aaKnown RBP10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 TFAP4Q01664 338 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 APOBRQ0VD83 1088 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 NFIAQ12857 509 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 KIF4BQ2VIQ3 1234 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 CPLX2Q6PUV4 134 aaKnown RBP10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 DGKHQ86XP1 1220 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 STK11IPQ8N1F8 1099 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 HOOK2Q96ED9 719 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 LRRC2Q9BYS8 371 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 LY9Q9HBG7 655 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 INCENPQ9NQS7 918 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 GPRC5DQ9NZD1 345 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 CHMP5Q9NZZ3 219 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 HERC5Q9UII4 1024 aaKnown RBP10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 SMC3Q9UQE7 1217 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 KIF3AQ9Y496 699 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 SLC12A7Q9Y666 1083 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 LAMB1P07942 1786 aa10.38□□□□□ -0.75
RNU1-28P-201ENST00000383861 KLF18A0A0U1RQI7 1052 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 PRDM1O75626 825 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 CDKL5O76039 1030 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 NUCB2P80303 420 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 HMGN5P82970 282 aaKnown RBP10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 TCP10Q12799 353 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 IFIT1BQ5T764 474 aaKnown RBP10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 CATIPQ7Z7H3 387 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 METTL16Q86W50 562 aaKnown RBP10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 APOBEC3FQ8IUX4 373 aaKnown RBP10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 NEDD1Q8NHV4 660 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms