RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 EVCP57679 992 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 TEX35Q5T0J7 233 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 FMR1NBQ8N0W7 255 aaPredicted RBP10.29□□□□□ -0.76
GPNMB-202ENST00000381990 FSIP1Q8NA03 581 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
GPNMB-202ENST00000381990 IQSEC3Q9UPP2 1182 aaPredicted RBP10.29□□□□□ -0.76
GPNMB-202ENST00000381990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.29□□□□□ -0.76
GPNMB-202ENST00000381990 FHOD1Q9Y613 1164 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 SALL1Q9NSC2 1324 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 PRC1O43663 620 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 CDK11BP21127 795 aaKnown RBP10.29□□□□□ -0.76
GPNMB-202ENST00000381990 TRDNQ13061 729 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 ZNF772Q68DY9 489 aaPredicted RBP10.29□□□□□ -0.76
GPNMB-202ENST00000381990 USP28Q96RU2 1077 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 NBPF3Q9H094 633 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 ARMT1Q9H993 441 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 PDS5AQ29RF7 1337 aaKnown RBP10.28□□□□□ -0.76
GPNMB-202ENST00000381990 PTPDC1A2A3K4 754 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 ETF1P62495 437 aaKnown RBP10.28□□□□□ -0.76
GPNMB-202ENST00000381990 CEBPZQ03701 1054 aaKnown RBP10.28□□□□□ -0.76
GPNMB-202ENST00000381990 GRAPQ13588 217 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 ERCC6LQ2NKX8 1250 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 PRR5LQ6MZQ0 368 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 CHST3Q7LGC8 479 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 GRAPLQ8TC17 118 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-202ENST00000381990 RTEL1Q9NZ71 1219 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 COL1A1P02452 1464 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-202ENST00000381990 TULP2O00295 520 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 ZBTB22O15209 634 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 CYP7A1P22680 504 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 PDIA3P30101 505 aaKnown RBP10.28□□□□□ -0.76
GPNMB-202ENST00000381990 CLCN6P51797 869 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 TXNRD1Q16881 649 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 TBC1D10CQ8IV04 446 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 IFNL3Q8IZI9 196 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 KCNG4Q8TDN1 519 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 NAPBQ9H115 298 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 EPB41L4AQ9HCS5 686 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-202ENST00000381990 ABCF2Q9UG63 623 aa10.28□□□□□ -0.76
GPNMB-202ENST00000381990 MYH13Q9UKX3 1938 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 MYO1BO43795 1136 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 ZRANB2O95218 330 aaKnown RBP eCLIP10.27□□□□□ -0.76
GPNMB-202ENST00000381990 PNMA6AP0CW24 399 aaPredicted RBP10.27□□□□□ -0.76
GPNMB-202ENST00000381990 HIBADHP31937 336 aaKnown RBP10.27□□□□□ -0.76
GPNMB-202ENST00000381990 ANTXR2P58335 489 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 ARMCX5Q6P1M9 558 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 TMCO3Q6UWJ1 677 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 SYT10Q6XYQ8 523 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 RGS22Q8NE09 1264 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 UBXN4Q92575 508 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 NACAP1Q9BZK3 213 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 RAI14Q9P0K7 980 aa10.27□□□□□ -0.76
GPNMB-202ENST00000381990 GSG1L2A8MUP6 293 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 EFCAB8A8MWE9 144 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 IKBKBO14920 756 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 SMC2O95347 1197 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 SERPINB2P05120 415 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 ST5P78524 1137 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 ARHGAP29Q52LW3 1261 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 FCHSD1Q86WN1 690 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 LCORLQ8N3X6 602 aa10.27□□□□□ -0.77
GPNMB-202ENST00000381990 XPO4Q9C0E2 1151 aaKnown RBP10.27□□□□□ -0.77
GPNMB-202ENST00000381990 YEATS4O95619 227 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 KLRK1P26718 216 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 IRX5P78411 483 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-202ENST00000381990 TMC6Q7Z403 805 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 PROM2Q8N271 834 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 POLR3EQ9NVU0 708 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 NAP1L2Q9ULW6 460 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-202ENST00000381990 PCDHA7Q9UN72 937 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 SLC4A4Q9Y6R1 1079 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 CACNA1SQ13698 1873 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 CHD4Q14839 1912 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 CTDNEP1O95476 244 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 CCT2P78371 535 aaKnown RBP10.26□□□□□ -0.77
GPNMB-202ENST00000381990 CRY2Q49AN0 593 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 HOMER1Q86YM7 354 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 RPGRQ92834 1020 aaKnown RBP10.26□□□□□ -0.77
GPNMB-202ENST00000381990 GPHNQ9NQX3 736 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-202ENST00000381990 IFNKQ9P0W0 207 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 LEMD3Q9Y2U8 911 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 TIAM2Q8IVF5 1701 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 CBFA2T2O43439 604 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 PRKAB2O43741 272 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 NLRP12P59046 1061 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 TXLNBQ8N3L3 684 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 MIGA1Q8NAN2 632 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 FTOQ9C0B1 505 aaKnown RBP eCLIP10.26□□□□□ -0.77
GPNMB-202ENST00000381990 TFCP2L1Q9NZI6 479 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 ORC3Q9UBD5 711 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-202ENST00000381990 DNAI1Q9UI46 699 aa10.26□□□□□ -0.77
GPNMB-202ENST00000381990 EP400Q96L91 3159 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 IRS2Q9Y4H2 1338 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 MAGEB6P1A0A0J9YX57 407 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 KLF18A0A0U1RQI7 1052 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 GOLGA6L9A6NEM1 432 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 PLSCR1O15162 318 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 DHX16O60231 1041 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms