RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NCAPHQ15003 741 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 ATRIPQ8WXE1 791 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 MYH7P12883 1935 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 ARHGAP6O43182 974 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 STX17P56962 302 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 RGS22Q8NE09 1264 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 COBLO75128 1261 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 MICALL1Q8N3F8 863 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 FBXL16Q8N461 479 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 MPHOSPH8Q99549 860 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 SOWAHDA6NJG2 315 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 PES1O00541 588 aaKnown RBP15.81■□□□□ 0.12
SDC1-202ENST00000381150 FOXN1O15353 648 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 ITGA6P23229 1130 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 ZAP70P43403 619 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 LLPHQ9BRT6 129 aaKnown RBP15.81■□□□□ 0.12
SDC1-202ENST00000381150 DEF6Q9H4E7 631 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 ROBO1Q9Y6N7 1651 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 KAT6BQ8WYB5 2073 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 EIF3JO75822 258 aaKnown RBP15.81■□□□□ 0.12
SDC1-202ENST00000381150 TXLNAP40222 546 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 TTC39AQ5SRH9 613 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 MYSM1Q5VVJ2 828 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 PI16Q6UXB8 463 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 ABCB6Q9NP58 842 aa15.81■□□□□ 0.12
SDC1-202ENST00000381150 EXOC5O00471 708 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 CTSWP56202 376 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 PPARDQ03181 441 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 ANO1Q5XXA6 986 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 EXOC4Q96A65 974 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 JRKLQ9Y4A0 524 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 ERVV-1B6SEH8 477 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 MUM1L1Q5H9M0 696 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 NFE2L3Q9Y4A8 694 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 UBN2Q6ZU65 1347 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 SALL1Q9NSC2 1324 aa15.8■□□□□ 0.12
SDC1-202ENST00000381150 MYO5AQ9Y4I1 1855 aaKnown RBP15.8■□□□□ 0.12
SDC1-202ENST00000381150 AHDC1Q5TGY3 1603 aaPredicted RBP15.8■□□□□ 0.12
SDC1-202ENST00000381150 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 KIF5CO60282 957 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 ERLIN1O75477 346 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 ZNF34Q8IZ26 560 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 PUS7LQ9H0K6 701 aaKnown RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 RTEL1Q9NZ71 1219 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 RAI14Q9P0K7 980 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 EIF3CLB5ME19 914 aaKnown RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 ZFYP08048 801 aaPredicted RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 MCAMP43121 646 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 FKBP15Q5T1M5 1219 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 ICE2Q659A1 982 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 LDHAL6AQ6ZMR3 332 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 GRAMD1CQ8IYS0 662 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 RABGGTAQ92696 567 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 ZNF512BQ96KM6 892 aaPredicted RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 EIF3CQ99613 913 aaKnown RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 PCDHA5Q9Y5H7 936 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 MRFAP1Q9Y605 127 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 DOT1LQ8TEK3 1739 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 KIF28PB7ZC32 967 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 IRS4O14654 1257 aaPredicted RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 ZMYND10O75800 440 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 IL6STP40189 918 aaPredicted RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 MAP3K9P80192 1104 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 AXDND1Q5T1B0 1012 aaPredicted RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 HDXQ7Z353 690 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 RALYLQ86SE5 291 aaKnown RBP15.79■□□□□ 0.12
SDC1-202ENST00000381150 VSTM4Q8IW00 320 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 MYH15Q9Y2K3 1946 aa15.79■□□□□ 0.12
SDC1-202ENST00000381150 APPP05067 770 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 FDPSP14324 419 aaKnown RBP15.78■□□□□ 0.12
SDC1-202ENST00000381150 PHKBQ93100 1093 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 MRPL44Q9H9J2 332 aaKnown RBP15.78■□□□□ 0.12
SDC1-202ENST00000381150 EFCC1Q9HA90 598 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 FGAP02671 866 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 PACS2Q86VP3 889 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 PPFIBP1Q86W92 1011 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 ZNF274Q96GC6 653 aaPredicted RBP15.78■□□□□ 0.12
SDC1-202ENST00000381150 PNKPQ96T60 521 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 IVLP07476 585 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 DNAJC21Q5F1R6 531 aaKnown RBP15.78■□□□□ 0.12
SDC1-202ENST00000381150 APPBP2Q92624 585 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 TBC1D2BQ9UPU7 963 aa15.78■□□□□ 0.12
SDC1-202ENST00000381150 TUBB4AP04350 444 aa15.77■□□□□ 0.12
SDC1-202ENST00000381150 METTL24Q5JXM2 366 aa15.77■□□□□ 0.12
SDC1-202ENST00000381150 MICU3Q86XE3 530 aa15.77■□□□□ 0.12
SDC1-202ENST00000381150 CDC5LQ99459 802 aaKnown RBP15.77■□□□□ 0.12
SDC1-202ENST00000381150 FAM204AQ9H8W3 233 aa15.77■□□□□ 0.12
SDC1-202ENST00000381150 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.12
SDC1-202ENST00000381150 LRP5O75197 1615 aa15.77■□□□□ 0.11
SDC1-202ENST00000381150 MROH7-TTC4A0A0A0MT08 1334 aa15.77■□□□□ 0.11
SDC1-202ENST00000381150 ANKRD18BA2A2Z9 1011 aa15.77■□□□□ 0.11
SDC1-202ENST00000381150 PDE8AO60658 829 aa15.77■□□□□ 0.11
SDC1-202ENST00000381150 CCDC175P0C221 793 aa15.77■□□□□ 0.11
SDC1-202ENST00000381150 PDE4BQ07343 736 aa15.77■□□□□ 0.11
SDC1-202ENST00000381150 PDE8BO95263 885 aa15.76■□□□□ 0.11
SDC1-202ENST00000381150 EIF5P55010 431 aaKnown RBP15.76■□□□□ 0.11
SDC1-202ENST00000381150 CCDC102BQ68D86 513 aa15.76■□□□□ 0.11
SDC1-202ENST00000381150 INTS5Q6P9B9 1019 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms