RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 MECOMQ03112 1051 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 PNOCQ13519 176 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 DOK7Q18PE1 504 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 LRP10Q7Z4F1 713 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 TCP11L1Q9NUJ3 509 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 NARFQ9UHQ1 456 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 GSG1L2A8MUP6 293 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 SERPINB2P05120 415 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 USP17L8P0C7I0 530 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 GNAQP50148 359 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 LRMPQ12912 555 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 UIMC1Q96RL1 719 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 SETD1AO15047 1707 aaKnown RBP14.29□□□□□ -0.12
CDX2-201ENST00000381020 OFD1O75665 1012 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 TCP10Q12799 353 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 MAPK8IP1Q9UQF2 711 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 CDC27P30260 824 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 TRMT1LQ7Z2T5 733 aaKnown RBP14.29□□□□□ -0.12
CDX2-201ENST00000381020 TMEM87AQ8NBN3 555 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 LINC00301Q8NCQ3 95 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 TANGO6Q9C0B7 1094 aa14.29□□□□□ -0.12
CDX2-201ENST00000381020 SCNN1DP51172 638 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 ZNF75DP51815 510 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 RRAGBQ5VZM2 374 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 DYNLL2Q96FJ2 89 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 GPCPD1Q9NPB8 672 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 KIAA1468Q9P260 1216 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 CYP2D6P10635 497 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 ZNF76P36508 570 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 ZNF827Q17R98 1081 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 RBM28Q9NW13 759 aaKnown RBP14.28□□□□□ -0.12
CDX2-201ENST00000381020 RTEL1Q9NZ71 1219 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 TRPC5Q9UL62 973 aaPredicted RBP14.28□□□□□ -0.12
CDX2-201ENST00000381020 STAT6P42226 847 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 NAP1L1P55209 391 aaKnown RBP14.28□□□□□ -0.12
CDX2-201ENST00000381020 KANK3Q6NY19 840 aa14.28□□□□□ -0.12
CDX2-201ENST00000381020 DPP8Q6V1X1 898 aaPredicted RBP14.28□□□□□ -0.12
CDX2-201ENST00000381020 FAM84BQ96KN1 310 aaPredicted RBP14.28□□□□□ -0.12
CDX2-201ENST00000381020 PLCG2P16885 1265 aa14.27□□□□□ -0.12
CDX2-201ENST00000381020 LETM2Q2VYF4 491 aa14.27□□□□□ -0.12
CDX2-201ENST00000381020 GPKOWQ92917 476 aaPredicted RBP eCLIP14.27□□□□□ -0.12
CDX2-201ENST00000381020 CCDC43Q96MW1 224 aaKnown RBP14.27□□□□□ -0.12
CDX2-201ENST00000381020 XRN1Q8IZH2 1706 aaKnown RBP14.27□□□□□ -0.12
CDX2-201ENST00000381020 NTSR2O95665 410 aa14.27□□□□□ -0.12
CDX2-201ENST00000381020 CALML3P27482 149 aa14.27□□□□□ -0.12
CDX2-201ENST00000381020 ST3GAL1Q11201 340 aa14.27□□□□□ -0.12
CDX2-201ENST00000381020 NRBP1Q9UHY1 535 aa14.27□□□□□ -0.12
CDX2-201ENST00000381020 NALCNQ8IZF0 1738 aa14.27□□□□□ -0.13
CDX2-201ENST00000381020 CUTAO60888 179 aa14.27□□□□□ -0.13
CDX2-201ENST00000381020 C11orf57Q6ZUT1 292 aaPredicted RBP14.27□□□□□ -0.13
CDX2-201ENST00000381020 PNMA1Q8ND90 353 aa14.27□□□□□ -0.13
CDX2-201ENST00000381020 CCDC12Q8WUD4 166 aaPredicted RBP14.27□□□□□ -0.13
CDX2-201ENST00000381020 TNNI2P48788 182 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 GSDMDP57764 484 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 TRMT44Q8IYL2 757 aaKnown RBP14.26□□□□□ -0.13
CDX2-201ENST00000381020 CCDC148Q8NFR7 591 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 SMARCC2Q8TAQ2 1214 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 LTN1O94822 1766 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 SPATA31A5Q5VU36 1347 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 SPATA31A7Q8IWB4 1347 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 WTIPA6NIX2 430 aaPredicted RBP14.26□□□□□ -0.13
CDX2-201ENST00000381020 NMT2O60551 498 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 ARID4AP29374 1257 aaPredicted RBP14.26□□□□□ -0.13
CDX2-201ENST00000381020 TTC38Q5R3I4 469 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 SERTAD1Q9UHV2 236 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 RFX7Q2KHR2 1363 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 EPS15P42566 896 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 BTDP43251 543 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 ANTXR2P58335 489 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 TTF2Q9UNY4 1162 aaKnown RBP14.26□□□□□ -0.13
CDX2-201ENST00000381020 AFF2P51816 1311 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 N4BP3O15049 544 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 CTDNEP1O95476 244 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 PARP1P09874 1014 aaKnown RBP14.26□□□□□ -0.13
CDX2-201ENST00000381020 SLC39A14Q15043 492 aa14.26□□□□□ -0.13
CDX2-201ENST00000381020 BMP15O95972 392 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 MYL5Q02045 173 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 PDE4CQ08493 712 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 PTPN21Q16825 1174 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 JAKMIP3Q5VZ66 844 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
CDX2-201ENST00000381020 ARPP21Q9UBL0 812 aaPredicted RBP14.25□□□□□ -0.13
CDX2-201ENST00000381020 NWD1Q149M9 1564 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 URI1O94763 535 aaPredicted RBP14.25□□□□□ -0.13
CDX2-201ENST00000381020 LIFRP42702 1097 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 DPCR1Q3MIW9 517 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 KIF18AQ8NI77 898 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 KCNB2Q92953 911 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 RRP36Q96EU6 259 aaKnown RBP14.25□□□□□ -0.13
CDX2-201ENST00000381020 EYA3Q99504 573 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDX2-201ENST00000381020 IFNAR1P17181 557 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 CMA1P23946 247 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 RASGRP4Q8TDF6 673 aa14.25□□□□□ -0.13
CDX2-201ENST00000381020 XDHP47989 1333 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 PRKCSHP14314 528 aaPredicted RBP14.24□□□□□ -0.13
CDX2-201ENST00000381020 NFIXQ14938 502 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 DTHD1Q6ZMT9 781 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms