RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 LZTS2Q9BRK4 669 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 TTC12Q9H892 705 aaPredicted RBP13.9□□□□□ -0.18
GABPB1-203ENST00000380877 ATP8A2Q9NTI2 1148 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 BTDP43251 543 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 ZNF445P59923 1031 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 NECTIN1Q15223 517 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 MED23Q9ULK4 1368 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 LIG1P18858 919 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 CETN1Q12798 172 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 CUL4AQ13619 759 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 DLGAP5Q15398 846 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 CMTR1Q8N1G2 835 aaKnown RBP13.9□□□□□ -0.18
GABPB1-203ENST00000380877 NARFQ9UHQ1 456 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 SKILP12757 684 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 TRIM21P19474 475 aaKnown RBP13.9□□□□□ -0.18
GABPB1-203ENST00000380877 SCNN1DP51172 638 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 SCRN1Q12765 414 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 JAKMIP3Q5VZ66 844 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 NIM1KQ8IY84 436 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 TAF4BQ92750 862 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 ZMYM6O95789 1325 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 CDHR2Q9BYE9 1310 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 CEMIPQ8WUJ3 1361 aa13.9□□□□□ -0.18
GABPB1-203ENST00000380877 ARID4AP29374 1257 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-203ENST00000380877 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-203ENST00000380877 TMEM63CQ9P1W3 806 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 CD163L1Q9NR16 1453 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 SNAP23O00161 211 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 CDR1P51861 262 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 COL15A1P39059 1388 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 SPECC1Q5M775 1068 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 PNMA1Q8ND90 353 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
GABPB1-203ENST00000380877 PIH1D3Q9NQM4 214 aaKnown RBP13.89□□□□□ -0.19
GABPB1-203ENST00000380877 SOS2Q07890 1332 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-203ENST00000380877 POLR2DO15514 142 aaKnown RBP13.89□□□□□ -0.19
GABPB1-203ENST00000380877 ERLIN1O75477 346 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 MCAMP43121 646 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
GABPB1-203ENST00000380877 PPEF1O14829 653 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-203ENST00000380877 USO1O60763 962 aaKnown RBP13.88□□□□□ -0.19
GABPB1-203ENST00000380877 ZNF202O95125 648 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 NF2P35240 595 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 RDXP35241 583 aaKnown RBP13.88□□□□□ -0.19
GABPB1-203ENST00000380877 TMC4Q7Z404 712 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 ZKSCAN5Q9Y2L8 839 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 PRKAB2O43741 272 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 PCP11498 1178 aaKnown RBP13.88□□□□□ -0.19
GABPB1-203ENST00000380877 DYNLL1P63167 89 aaKnown RBP13.88□□□□□ -0.19
GABPB1-203ENST00000380877 MYL5Q02045 173 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 NONOQ15233 471 aaKnown RBP eCLIP13.88□□□□□ -0.196e-6■□□□□ 10
GABPB1-203ENST00000380877 ZYXQ15942 572 aaKnown RBP13.88□□□□□ -0.19
GABPB1-203ENST00000380877 FCHSD1Q86WN1 690 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 LCORLQ8N3X6 602 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 IFNKQ9P0W0 207 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 PLS1Q14651 629 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 APOA5Q6Q788 366 aa13.88□□□□□ -0.19
GABPB1-203ENST00000380877 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 PLCD1P51178 756 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 SNW1Q13573 536 aaKnown RBP13.87□□□□□ -0.19
GABPB1-203ENST00000380877 KRT25Q7Z3Z0 450 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 NAP1L4Q99733 375 aaKnown RBP13.87□□□□□ -0.19
GABPB1-203ENST00000380877 GLT8D2Q9H1C3 349 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 GOLGA6L9A6NEM1 432 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 CASQ1P31415 396 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 FBXO18Q8NFZ0 1043 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.87□□□□□ -0.195e-6■■■■□ 23.6
GABPB1-203ENST00000380877 TNNT3P45378 269 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-203ENST00000380877 GRAPQ13588 217 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 GRAPLQ8TC17 118 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-203ENST00000380877 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
GABPB1-203ENST00000380877 FOXO4P98177 505 aa13.87□□□□□ -0.19
GABPB1-203ENST00000380877 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-203ENST00000380877 MPHOSPH6Q99547 160 aaKnown RBP13.87□□□□□ -0.19
GABPB1-203ENST00000380877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.87□□□□□ -0.19
GABPB1-203ENST00000380877 JCADQ9P266 1359 aa13.86□□□□□ -0.19
GABPB1-203ENST00000380877 CCNT1O60563 726 aaKnown RBP13.86□□□□□ -0.19
GABPB1-203ENST00000380877 ADCY7P51828 1080 aa13.86□□□□□ -0.19
GABPB1-203ENST00000380877 NOSTRINQ8IVI9 506 aa13.86□□□□□ -0.19
GABPB1-203ENST00000380877 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
GABPB1-203ENST00000380877 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
GABPB1-203ENST00000380877 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
GABPB1-203ENST00000380877 AKR1B10O60218 316 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 TXKP42681 527 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 TMX1Q9H3N1 280 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 PRM3Q9NNZ6 103 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 BTBD18B2RXH4 712 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 NOLC1Q14978 699 aaKnown RBP eCLIP13.85□□□□□ -0.19
GABPB1-203ENST00000380877 SLFNL1Q499Z3 407 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 REXO1Q8N1G1 1221 aaKnown RBP13.85□□□□□ -0.19
GABPB1-203ENST00000380877 NSUN7Q8NE18 718 aaKnown RBP13.85□□□□□ -0.19
GABPB1-203ENST00000380877 FERMT2Q96AC1 680 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-203ENST00000380877 BICDL2A1A5D9 508 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms