RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 MYPNQ86TC9 1320 aa21.13■□□□□ 0.97
HMGN1-204ENST00000380749 TRIM75PA6NK02 468 aa21.12■□□□□ 0.97
HMGN1-204ENST00000380749 SLURP2P0DP57 97 aa21.12■□□□□ 0.97
HMGN1-204ENST00000380749 BCRP11274 1271 aa21.12■□□□□ 0.97
HMGN1-204ENST00000380749 RLBP1P12271 317 aa21.12■□□□□ 0.97
HMGN1-204ENST00000380749 PLCG2P16885 1265 aa21.12■□□□□ 0.97
HMGN1-204ENST00000380749 OSBPP22059 807 aa21.12■□□□□ 0.97
HMGN1-204ENST00000380749 FCGRTP55899 365 aa21.12■□□□□ 0.97
HMGN1-204ENST00000380749 ZNF512BQ96KM6 892 aaPredicted RBP21.12■□□□□ 0.97
HMGN1-204ENST00000380749 NOP58Q9Y2X3 529 aaKnown RBP21.12■□□□□ 0.97
HMGN1-204ENST00000380749 FAM196BA6NMK8 535 aa21.11■□□□□ 0.97
HMGN1-204ENST00000380749 IGSF3O75054 1194 aa21.11■□□□□ 0.97
HMGN1-204ENST00000380749 MYCP01106 439 aaPredicted RBP21.11■□□□□ 0.97
HMGN1-204ENST00000380749 CTGFP29279 349 aa21.11■□□□□ 0.97
HMGN1-204ENST00000380749 SH3RF3Q8TEJ3 882 aaPredicted RBP21.11■□□□□ 0.97
HMGN1-204ENST00000380749 SMCR8Q8TEV9 937 aaPredicted RBP21.11■□□□□ 0.97
HMGN1-204ENST00000380749 TBC1D2Q9BYX2 928 aa21.11■□□□□ 0.97
HMGN1-204ENST00000380749 AATFQ9NY61 560 aaKnown RBP eCLIP21.11■□□□□ 0.97
HMGN1-204ENST00000380749 HERC5Q9UII4 1024 aaKnown RBP21.11■□□□□ 0.97
HMGN1-204ENST00000380749 ZBTB7BO15156 539 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-204ENST00000380749 GCC1Q96CN9 775 aa21.1■□□□□ 0.97
HMGN1-204ENST00000380749 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-204ENST00000380749 PNMA3Q9UL41 463 aa21.1■□□□□ 0.97
HMGN1-204ENST00000380749 AGTPBP1Q9UPW5 1226 aa21.1■□□□□ 0.97
HMGN1-204ENST00000380749 NAV1Q8NEY1 1877 aa21.1■□□□□ 0.97
HMGN1-204ENST00000380749 TRIOBPQ9H2D6 2365 aa21.1■□□□□ 0.97
HMGN1-204ENST00000380749 MYH8P13535 1937 aa21.1■□□□□ 0.97
HMGN1-204ENST00000380749 CCDC84Q86UT8 332 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-204ENST00000380749 DHX36Q9H2U1 1008 aaKnown RBP21.1■□□□□ 0.97
HMGN1-204ENST00000380749 DBNLQ9UJU6 430 aaKnown RBP21.1■□□□□ 0.97
HMGN1-204ENST00000380749 CYP2E1P05181 493 aaPredicted RBP21.09■□□□□ 0.97
HMGN1-204ENST00000380749 GRK4P32298 578 aa21.09■□□□□ 0.97
HMGN1-204ENST00000380749 PROCA1Q8NCQ7 364 aaPredicted RBP21.09■□□□□ 0.97
HMGN1-204ENST00000380749 PI4KBQ9UBF8 816 aa21.09■□□□□ 0.97
HMGN1-204ENST00000380749 CAP2P40123 477 aa21.08■□□□□ 0.96
HMGN1-204ENST00000380749 PPP4CP60510 307 aa21.08■□□□□ 0.96
HMGN1-204ENST00000380749 CEP85Q6P2H3 762 aa21.08■□□□□ 0.96
HMGN1-204ENST00000380749 ERC1Q8IUD2 1116 aa21.08■□□□□ 0.96
HMGN1-204ENST00000380749 ZNF280CQ8ND82 737 aa21.08■□□□□ 0.96
HMGN1-204ENST00000380749 TLR7Q9NYK1 1049 aaKnown RBP21.08■□□□□ 0.96
HMGN1-204ENST00000380749 MYH7P12883 1935 aa21.07■□□□□ 0.96
HMGN1-204ENST00000380749 ZAP70P43403 619 aa21.07■□□□□ 0.96
HMGN1-204ENST00000380749 PRKCZQ05513 592 aa21.07■□□□□ 0.96
HMGN1-204ENST00000380749 MAPKAPK5Q8IW41 473 aa21.07■□□□□ 0.96
HMGN1-204ENST00000380749 TRIM34Q9BYJ4 488 aa21.07■□□□□ 0.96
HMGN1-204ENST00000380749 AS3MTQ9HBK9 375 aa21.07■□□□□ 0.96
HMGN1-204ENST00000380749 FLT1P17948 1338 aa21.07■□□□□ 0.96
HMGN1-204ENST00000380749 MS4A1P11836 297 aa21.06■□□□□ 0.96
HMGN1-204ENST00000380749 SPP2Q13103 211 aa21.06■□□□□ 0.96
HMGN1-204ENST00000380749 PABPC4Q13310 644 aaKnown RBP eCLIP21.06■□□□□ 0.964e-10■□□□□ 10.7
HMGN1-204ENST00000380749 ADGRA1Q86SQ6 560 aa21.06■□□□□ 0.96
HMGN1-204ENST00000380749 SLAIN1Q8ND83 568 aa21.06■□□□□ 0.96
HMGN1-204ENST00000380749 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
HMGN1-204ENST00000380749 CCDC8Q9H0W5 538 aaPredicted RBP21.06■□□□□ 0.96
HMGN1-204ENST00000380749 BIN2Q9UBW5 565 aaPredicted RBP21.06■□□□□ 0.96
HMGN1-204ENST00000380749 USP17L5A8MUK1 530 aa21.05■□□□□ 0.96
HMGN1-204ENST00000380749 TNPO2O14787 897 aaKnown RBP21.05■□□□□ 0.96
HMGN1-204ENST00000380749 UBXN2AP68543 259 aa21.05■□□□□ 0.96
HMGN1-204ENST00000380749 TREML2Q5T2D2 321 aa21.05■□□□□ 0.96
HMGN1-204ENST00000380749 CERS3Q8IU89 383 aa21.05■□□□□ 0.96
HMGN1-204ENST00000380749 CRACR2BQ8N4Y2 399 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-204ENST00000380749 EAF2Q96CJ1 260 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-204ENST00000380749 PIH1D3Q9NQM4 214 aaKnown RBP21.05■□□□□ 0.96
HMGN1-204ENST00000380749 DDX60LQ5H9U9 1706 aaKnown RBP21.05■□□□□ 0.96
HMGN1-204ENST00000380749 IDH1O75874 414 aaKnown RBP21.04■□□□□ 0.96
HMGN1-204ENST00000380749 ASNSP08243 561 aa21.04■□□□□ 0.96
HMGN1-204ENST00000380749 HMGCS2P54868 508 aa21.04■□□□□ 0.96
HMGN1-204ENST00000380749 MTFR1Q15390 333 aa21.04■□□□□ 0.96
HMGN1-204ENST00000380749 FAM110CQ1W6H9 321 aa21.04■□□□□ 0.96
HMGN1-204ENST00000380749 NKX2-3Q8TAU0 364 aa21.04■□□□□ 0.96
HMGN1-204ENST00000380749 PANK1Q8TE04 598 aa21.04■□□□□ 0.96
HMGN1-204ENST00000380749 EXOC6BQ9Y2D4 811 aa21.04■□□□□ 0.96
HMGN1-204ENST00000380749 HLA-DOAP06340 250 aa21.03■□□□□ 0.96
HMGN1-204ENST00000380749 CYP7A1P22680 504 aa21.03■□□□□ 0.96
HMGN1-204ENST00000380749 HSP90AB4PQ58FF6 505 aa21.03■□□□□ 0.96
HMGN1-204ENST00000380749 AACSQ86V21 672 aa21.03■□□□□ 0.96
HMGN1-204ENST00000380749 GCLCP48506 637 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-204ENST00000380749 RRP1BQ14684 758 aaKnown RBP21.02■□□□□ 0.96
HMGN1-204ENST00000380749 TMED8Q6PL24 325 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-204ENST00000380749 FOXP4Q8IVH2 680 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-204ENST00000380749 ANKRD13CQ8N6S4 541 aa21.02■□□□□ 0.96
HMGN1-204ENST00000380749 GINM1Q9NU53 330 aa21.02■□□□□ 0.96
HMGN1-204ENST00000380749 GABRQQ9UN88 632 aa21.02■□□□□ 0.96
HMGN1-204ENST00000380749 RANBP2P49792 3224 aaKnown RBP21.02■□□□□ 0.96
HMGN1-204ENST00000380749 CCL5P13501 91 aa21.01■□□□□ 0.95
HMGN1-204ENST00000380749 FLT3LGP49771 235 aa21.01■□□□□ 0.95
HMGN1-204ENST00000380749 MAP3K12Q12852 859 aa21.01■□□□□ 0.95
HMGN1-204ENST00000380749 COA7Q96BR5 231 aa21.01■□□□□ 0.95
HMGN1-204ENST00000380749 PALD1Q9ULE6 856 aa21.01■□□□□ 0.95
HMGN1-204ENST00000380749 PLXNB2O15031 1838 aa21.01■□□□□ 0.95
HMGN1-204ENST00000380749 ADCY3O60266 1144 aa21■□□□□ 0.95
HMGN1-204ENST00000380749 GJB1P08034 283 aa21■□□□□ 0.95
HMGN1-204ENST00000380749 DYNLL1P63167 89 aaKnown RBP21■□□□□ 0.95
HMGN1-204ENST00000380749 MTMR2Q13614 643 aa21■□□□□ 0.95
HMGN1-204ENST00000380749 SH3D19Q5HYK7 790 aa21■□□□□ 0.95
HMGN1-204ENST00000380749 METTL16Q86W50 562 aaKnown RBP21■□□□□ 0.95
HMGN1-204ENST00000380749 MAGEB6Q8N7X4 407 aa21■□□□□ 0.95
HMGN1-204ENST00000380749 SHISA4Q96DD7 197 aa21■□□□□ 0.95
HMGN1-204ENST00000380749 WDR18Q9BV38 432 aa21■□□□□ 0.95
HMGN1-204ENST00000380749 RNF208Q9H0X6 261 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms