RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DYNLL1P63167 89 aaKnown RBP14.6□□□□□ -0.07
VPS16-202ENST00000380445 GRAPQ13588 217 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 CNBD1Q8NA66 436 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
VPS16-202ENST00000380445 DNAJC25Q9H1X3 360 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 TFCP2L1Q9NZI6 479 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.6□□□□□ -0.07
VPS16-202ENST00000380445 MYH13Q9UKX3 1938 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 TNKSO95271 1327 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 SLC3A2P08195 630 aaKnown RBP14.6□□□□□ -0.07
VPS16-202ENST00000380445 FGRP09769 529 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 CMA1P23946 247 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 SMAP1Q8IYB5 467 aaPredicted RBP14.6□□□□□ -0.07
VPS16-202ENST00000380445 SBF2Q86WG5 1849 aa14.6□□□□□ -0.07
VPS16-202ENST00000380445 AFF2P51816 1311 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 GOLGA6L19H0YKK7 550 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 HMGB2P26583 209 aaKnown RBP14.59□□□□□ -0.07
VPS16-202ENST00000380445 STK11IPQ8N1F8 1099 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
VPS16-202ENST00000380445 A0A1B0GVL5 298 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 CALM1P0DP23 149 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 CALM2P0DP24 149 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 CALM3P0DP25 149 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 KLRK1P26718 216 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 NT5C2P49902 561 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 CHAF1AQ13111 956 aaPredicted RBP14.59□□□□□ -0.07
VPS16-202ENST00000380445 NFIXQ14938 502 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 SEC23AQ15436 765 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 ZRSR1Q15695 479 aaKnown RBP14.59□□□□□ -0.07
VPS16-202ENST00000380445 AMIGO3Q86WK7 504 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 SEPT12Q8IYM1 358 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 CCDC24Q8N4L8 307 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
VPS16-202ENST00000380445 WDR66Q8TBY9 1149 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.59□□□□□ -0.07
VPS16-202ENST00000380445 NAT10Q9H0A0 1025 aaKnown RBP14.59□□□□□ -0.07
VPS16-202ENST00000380445 FAM13BQ9NYF5 915 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 ANKIB1Q9P2G1 1089 aa14.59□□□□□ -0.07
VPS16-202ENST00000380445 NDUFA8P51970 172 aa14.58□□□□□ -0.07
VPS16-202ENST00000380445 CTR9Q6PD62 1173 aa14.58□□□□□ -0.07
VPS16-202ENST00000380445 ZNF384Q8TF68 577 aa14.58□□□□□ -0.07
VPS16-202ENST00000380445 NUP133Q8WUM0 1156 aa14.58□□□□□ -0.07
VPS16-202ENST00000380445 MMP1P03956 469 aa14.58□□□□□ -0.08
VPS16-202ENST00000380445 XBP1P17861 261 aa14.58□□□□□ -0.08
VPS16-202ENST00000380445 AKAP17AQ02040 695 aaKnown RBP14.58□□□□□ -0.08
VPS16-202ENST00000380445 IFIT1BQ5T764 474 aaKnown RBP14.58□□□□□ -0.08
VPS16-202ENST00000380445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.58□□□□□ -0.08
VPS16-202ENST00000380445 CATIPQ7Z7H3 387 aa14.58□□□□□ -0.08
VPS16-202ENST00000380445 FOXP1Q9H334 677 aaPredicted RBP14.58□□□□□ -0.08
VPS16-202ENST00000380445 RBM28Q9NW13 759 aaKnown RBP14.58□□□□□ -0.08
VPS16-202ENST00000380445 ARPP21Q9UBL0 812 aaPredicted RBP14.58□□□□□ -0.08
VPS16-202ENST00000380445 USP17L12C9JPN9 530 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 USP17L21D6R901 530 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 AP5Z1O43299 807 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 AXDND1Q5T1B0 1012 aaPredicted RBP14.57□□□□□ -0.08
VPS16-202ENST00000380445 DZIP1Q86YF9 867 aaKnown RBP14.57□□□□□ -0.08
VPS16-202ENST00000380445 NOSTRINQ8IVI9 506 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 RNF26Q9BY78 433 aaPredicted RBP14.57□□□□□ -0.08
VPS16-202ENST00000380445 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.57□□□□□ -0.08
VPS16-202ENST00000380445 AATFQ9NY61 560 aaKnown RBP eCLIP14.57□□□□□ -0.08
VPS16-202ENST00000380445 DUOX1Q9NRD9 1551 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 XDHP47989 1333 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 SBK1Q52WX2 424 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 NBPF11Q86T75 865 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 TIGD1Q96MW7 591 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 MAST2Q6P0Q8 1798 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 CCDC88AQ3V6T2 1871 aa14.57□□□□□ -0.08
VPS16-202ENST00000380445 BECN2A8MW95 431 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 ORC4O43929 436 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 ZNF202O95125 648 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 PRDX5P30044 214 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 TERF1P54274 439 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 SLC27A3Q5K4L6 730 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 ZNF804AQ7Z570 1209 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 CEP57L1Q8IYX8 460 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 ENAHQ8N8S7 591 aaPredicted RBP14.56□□□□□ -0.08
VPS16-202ENST00000380445 RPGRQ92834 1020 aaKnown RBP14.56□□□□□ -0.08
VPS16-202ENST00000380445 TRIM5Q9C035 493 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 DCP1AQ9NPI6 582 aaPredicted RBP14.56□□□□□ -0.08
VPS16-202ENST00000380445 IRS2Q9Y4H2 1338 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.56□□□□□ -0.08
VPS16-202ENST00000380445 GSTO1P78417 241 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 ST5P78524 1137 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 PDE4BQ07343 736 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 RILPL1Q5EBL4 403 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 C15orf52Q6ZUT6 534 aaKnown RBP14.56□□□□□ -0.08
VPS16-202ENST00000380445 MAP3K14Q99558 947 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 KIAA1468Q9P260 1216 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 ECM29Q5VYK3 1845 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 IQCB1Q15051 598 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 PTPAQ15257 358 aa14.56□□□□□ -0.08
VPS16-202ENST00000380445 DIS3L2Q8IYB7 885 aaKnown RBP14.56□□□□□ -0.08
VPS16-202ENST00000380445 CUTAO60888 179 aa14.55□□□□□ -0.08
VPS16-202ENST00000380445 LDHBP07195 334 aaKnown RBP14.55□□□□□ -0.08
VPS16-202ENST00000380445 PFKFB1P16118 471 aa14.55□□□□□ -0.08
VPS16-202ENST00000380445 MARCKSP29966 332 aaPredicted RBP14.55□□□□□ -0.08
VPS16-202ENST00000380445 ZHX1Q9UKY1 873 aaPredicted RBP14.55□□□□□ -0.08
VPS16-202ENST00000380445 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
VPS16-202ENST00000380445 TNRC6CQ9HCJ0 1690 aaKnown RBP14.55□□□□□ -0.08
VPS16-202ENST00000380445 DDAH1O94760 285 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms