RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PNMA6EA0A0J9YXQ4 647 aa28.44■■■□□ 2.14
U2AF1-202ENST00000380276 TBC1D12O60347 775 aa28.44■■■□□ 2.14
U2AF1-202ENST00000380276 TRIM27P14373 513 aa28.44■■■□□ 2.14
U2AF1-202ENST00000380276 SPP2Q13103 211 aa28.44■■■□□ 2.14
U2AF1-202ENST00000380276 COA7Q96BR5 231 aa28.44■■■□□ 2.14
U2AF1-202ENST00000380276 FARP2O94887 1054 aaPredicted RBP28.43■■■□□ 2.14
U2AF1-202ENST00000380276 INHAP05111 366 aa28.43■■■□□ 2.14
U2AF1-202ENST00000380276 UQCRFS1P1P0C7P4 283 aa28.43■■■□□ 2.14
U2AF1-202ENST00000380276 ARID4AP29374 1257 aaPredicted RBP28.43■■■□□ 2.14
U2AF1-202ENST00000380276 ATF7IPQ6VMQ6 1270 aa28.43■■■□□ 2.14
U2AF1-202ENST00000380276 NPM3O75607 178 aaKnown RBP28.42■■■□□ 2.14
U2AF1-202ENST00000380276 BCAR3O75815 825 aa28.42■■■□□ 2.14
U2AF1-202ENST00000380276 MAP4K4O95819 1239 aaPredicted RBP28.42■■■□□ 2.14
U2AF1-202ENST00000380276 MCAMP43121 646 aa28.42■■■□□ 2.14
U2AF1-202ENST00000380276 OS9Q13438 667 aaPredicted RBP28.42■■■□□ 2.14
U2AF1-202ENST00000380276 ATAD5Q96QE3 1844 aa28.41■■■□□ 2.14
U2AF1-202ENST00000380276 HMGCS2P54868 508 aa28.41■■■□□ 2.14
U2AF1-202ENST00000380276 TTC39AQ5SRH9 613 aa28.41■■■□□ 2.14
U2AF1-202ENST00000380276 PROCA1Q8NCQ7 364 aaPredicted RBP28.41■■■□□ 2.14
U2AF1-202ENST00000380276 ZNF280CQ8ND82 737 aa28.41■■■□□ 2.14
U2AF1-202ENST00000380276 SH3RF3Q8TEJ3 882 aaPredicted RBP28.41■■■□□ 2.14
U2AF1-202ENST00000380276 SNRKQ9NRH2 765 aa28.41■■■□□ 2.14
U2AF1-202ENST00000380276 SGPL1O95470 568 aa28.4■■■□□ 2.14
U2AF1-202ENST00000380276 TFRCP02786 760 aaKnown RBP28.4■■■□□ 2.14
U2AF1-202ENST00000380276 CCER2I3L3R5 266 aa28.39■■■□□ 2.14
U2AF1-202ENST00000380276 CAP2P40123 477 aa28.39■■■□□ 2.14
U2AF1-202ENST00000380276 PABPC4Q13310 644 aaKnown RBP eCLIP28.39■■■□□ 2.14
U2AF1-202ENST00000380276 IRF5Q13568 498 aa28.39■■■□□ 2.14
U2AF1-202ENST00000380276 NAA16Q6N069 864 aaPredicted RBP28.39■■■□□ 2.14
U2AF1-202ENST00000380276 PXYLP1Q8TE99 480 aa28.39■■■□□ 2.14
U2AF1-202ENST00000380276 DEFB118Q96PH6 123 aa28.39■■■□□ 2.14
U2AF1-202ENST00000380276 AS3MTQ9HBK9 375 aa28.39■■■□□ 2.14
U2AF1-202ENST00000380276 AATFQ9NY61 560 aaKnown RBP eCLIP28.39■■■□□ 2.14
U2AF1-202ENST00000380276 COL2A1P02458 1487 aaPredicted RBP28.39■■■□□ 2.13
U2AF1-202ENST00000380276 USP17L5A8MUK1 530 aa28.38■■■□□ 2.13
U2AF1-202ENST00000380276 FAM110CQ1W6H9 321 aa28.38■■■□□ 2.13
U2AF1-202ENST00000380276 TRIM34Q9BYJ4 488 aa28.38■■■□□ 2.13
U2AF1-202ENST00000380276 TBC1D2Q9BYX2 928 aa28.38■■■□□ 2.13
U2AF1-202ENST00000380276 NR2E3Q9Y5X4 410 aa28.38■■■□□ 2.13
U2AF1-202ENST00000380276 BAG3O95817 575 aa28.37■■■□□ 2.13
U2AF1-202ENST00000380276 CCDC158Q5M9N0 1113 aa28.37■■■□□ 2.13
U2AF1-202ENST00000380276 UBE2Q1Q7Z7E8 422 aa28.37■■■□□ 2.13
U2AF1-202ENST00000380276 HERC5Q9UII4 1024 aaKnown RBP28.37■■■□□ 2.13
U2AF1-202ENST00000380276 LOC285556D6RIA3 1793 aa28.37■■■□□ 2.13
U2AF1-202ENST00000380276 RRP1BQ14684 758 aaKnown RBP28.36■■■□□ 2.13
U2AF1-202ENST00000380276 MAPKAPK5Q8IW41 473 aa28.36■■■□□ 2.13
U2AF1-202ENST00000380276 TMEM57Q8N5G2 664 aa28.36■■■□□ 2.13
U2AF1-202ENST00000380276 RBM27Q9P2N5 1060 aaKnown RBP28.36■■■□□ 2.13
U2AF1-202ENST00000380276 MAST2Q6P0Q8 1798 aa28.35■■■□□ 2.13
U2AF1-202ENST00000380276 GCLCP48506 637 aaPredicted RBP28.35■■■□□ 2.13
U2AF1-202ENST00000380276 TNNI3KQ59H18 835 aa28.35■■■□□ 2.13
U2AF1-202ENST00000380276 DBNDD2Q9BQY9 259 aa28.35■■■□□ 2.13
U2AF1-202ENST00000380276 PI4KBQ9UBF8 816 aa28.35■■■□□ 2.13
U2AF1-202ENST00000380276 FPGT-TNNI3KV9GXZ4 949 aa28.35■■■□□ 2.13
U2AF1-202ENST00000380276 CRACR2BQ8N4Y2 399 aaPredicted RBP28.34■■■□□ 2.13
U2AF1-202ENST00000380276 TGFBRAP1Q8WUH2 860 aa28.34■■■□□ 2.13
U2AF1-202ENST00000380276 ASCC2Q9H1I8 757 aaPredicted RBP28.34■■■□□ 2.13
U2AF1-202ENST00000380276 PLCG2P16885 1265 aa28.33■■■□□ 2.13
U2AF1-202ENST00000380276 IRX3P78415 501 aaPredicted RBP28.33■■■□□ 2.13
U2AF1-202ENST00000380276 ZKSCAN2Q63HK3 967 aa28.33■■■□□ 2.13
U2AF1-202ENST00000380276 DHX36Q9H2U1 1008 aaKnown RBP28.33■■■□□ 2.13
U2AF1-202ENST00000380276 TMOD4Q9NZQ9 345 aa28.33■■■□□ 2.13
U2AF1-202ENST00000380276 EVI5O60447 810 aa28.32■■■□□ 2.12
U2AF1-202ENST00000380276 MTMR2Q13614 643 aa28.32■■■□□ 2.12
U2AF1-202ENST00000380276 C1orf115Q9H7X2 142 aa28.32■■■□□ 2.12
U2AF1-202ENST00000380276 SURF6O75683 361 aaKnown RBP28.31■■■□□ 2.12
U2AF1-202ENST00000380276 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.31■■■□□ 2.12
U2AF1-202ENST00000380276 FLT1P17948 1338 aa28.3■■■□□ 2.12
U2AF1-202ENST00000380276 SH3D19Q5HYK7 790 aa28.3■■■□□ 2.12
U2AF1-202ENST00000380276 GPR108Q9NPR9 543 aa28.3■■■□□ 2.12
U2AF1-202ENST00000380276 PAK6Q9NQU5 681 aaPredicted RBP28.3■■■□□ 2.12
U2AF1-202ENST00000380276 SAP30BPQ9UHR5 308 aaKnown RBP28.3■■■□□ 2.12
U2AF1-202ENST00000380276 ZBTB7BO15156 539 aaPredicted RBP28.29■■■□□ 2.12
U2AF1-202ENST00000380276 GDF11O95390 407 aa28.29■■■□□ 2.12
U2AF1-202ENST00000380276 ASNSP08243 561 aa28.29■■■□□ 2.12
U2AF1-202ENST00000380276 ZAP70P43403 619 aa28.29■■■□□ 2.12
U2AF1-202ENST00000380276 ADGRA1Q86SQ6 560 aa28.29■■■□□ 2.12
U2AF1-202ENST00000380276 PALD1Q9ULE6 856 aa28.29■■■□□ 2.12
U2AF1-202ENST00000380276 SIPA1L1O43166 1804 aa28.29■■■□□ 2.12
U2AF1-202ENST00000380276 HMGCRP04035 888 aa28.28■■■□□ 2.12
U2AF1-202ENST00000380276 CYP2E1P05181 493 aaPredicted RBP28.28■■■□□ 2.12
U2AF1-202ENST00000380276 POLA2Q14181 598 aa28.28■■■□□ 2.12
U2AF1-202ENST00000380276 FTSJ3Q8IY81 847 aaKnown RBP28.28■■■□□ 2.12
U2AF1-202ENST00000380276 PAWRQ96IZ0 340 aaKnown RBP28.28■■■□□ 2.12
U2AF1-202ENST00000380276 DOCK3Q8IZD9 2030 aa28.28■■■□□ 2.12
U2AF1-202ENST00000380276 CEP290O15078 2479 aa28.27■■■□□ 2.12
U2AF1-202ENST00000380276 HLA-DOAP06340 250 aa28.27■■■□□ 2.12
U2AF1-202ENST00000380276 CAPN2P17655 700 aa28.27■■■□□ 2.12
U2AF1-202ENST00000380276 BACE1P56817 501 aa28.27■■■□□ 2.12
U2AF1-202ENST00000380276 ATP8B2P98198 1209 aa28.27■■■□□ 2.12
U2AF1-202ENST00000380276 WDR18Q9BV38 432 aa28.27■■■□□ 2.12
U2AF1-202ENST00000380276 PPP4CP60510 307 aa28.26■■■□□ 2.11
U2AF1-202ENST00000380276 DYNLL1P63167 89 aaKnown RBP28.26■■■□□ 2.11
U2AF1-202ENST00000380276 SHROOM1Q2M3G4 852 aaPredicted RBP28.26■■■□□ 2.11
U2AF1-202ENST00000380276 FOXP4Q8IVH2 680 aaPredicted RBP28.26■■■□□ 2.11
U2AF1-202ENST00000380276 ITPRIPQ8IWB1 547 aa28.26■■■□□ 2.11
U2AF1-202ENST00000380276 SSH3Q8TE77 659 aa28.26■■■□□ 2.11
U2AF1-202ENST00000380276 CCDC8Q9H0W5 538 aaPredicted RBP28.26■■■□□ 2.11
U2AF1-202ENST00000380276 DNAJC18Q9H819 358 aa28.26■■■□□ 2.11
U2AF1-202ENST00000380276 PIH1D3Q9NQM4 214 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms