RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 ZNF213O14771 459 aa29.08■■■□□ 2.25
TM6SF1-204ENST00000379390 CYP21A2P08686 494 aa29.08■■■□□ 2.25
TM6SF1-204ENST00000379390 DYNLL2Q96FJ2 89 aa29.08■■■□□ 2.25
TM6SF1-204ENST00000379390 PI4KBQ9UBF8 816 aa29.08■■■□□ 2.25
TM6SF1-204ENST00000379390 TAF6LQ9Y6J9 622 aa29.08■■■□□ 2.25
TM6SF1-204ENST00000379390 ROBO3Q96MS0 1386 aa29.07■■■□□ 2.24
TM6SF1-204ENST00000379390 SLC27A2O14975 620 aa29.07■■■□□ 2.24
TM6SF1-204ENST00000379390 CREB3L3Q68CJ9 461 aa29.07■■■□□ 2.24
TM6SF1-204ENST00000379390 CDCA5Q96FF9 252 aa29.07■■■□□ 2.24
TM6SF1-204ENST00000379390 FMR1Q06787 632 aaKnown RBP eCLIP29.06■■■□□ 2.24
TM6SF1-204ENST00000379390 TBC1D10CQ8IV04 446 aa29.06■■■□□ 2.24
TM6SF1-204ENST00000379390 SLC44A5Q8NCS7 719 aa29.06■■■□□ 2.24
TM6SF1-204ENST00000379390 SERPINB13Q9UIV8 391 aa29.06■■■□□ 2.24
TM6SF1-204ENST00000379390 ATAD5Q96QE3 1844 aa29.06■■■□□ 2.24
TM6SF1-204ENST00000379390 EPB41L2O43491 1005 aaKnown RBP29.05■■■□□ 2.24
TM6SF1-204ENST00000379390 MIGA2Q7L4E1 593 aa29.05■■■□□ 2.24
TM6SF1-204ENST00000379390 CRACR2BQ8N4Y2 399 aaPredicted RBP29.05■■■□□ 2.24
TM6SF1-204ENST00000379390 ANAPC4Q9UJX5 808 aa29.05■■■□□ 2.24
TM6SF1-204ENST00000379390 OTOFQ9HC10 1997 aa29.05■■■□□ 2.24
TM6SF1-204ENST00000379390 HSPA4P34932 840 aa29.05■■■□□ 2.24
TM6SF1-204ENST00000379390 EHD4Q9H223 541 aa29.05■■■□□ 2.24
TM6SF1-204ENST00000379390 DNAJC18Q9H819 358 aa29.05■■■□□ 2.24
TM6SF1-204ENST00000379390 INCENPQ9NQS7 918 aa29.04■■■□□ 2.24
TM6SF1-204ENST00000379390 TACC3Q9Y6A5 838 aa29.04■■■□□ 2.24
TM6SF1-204ENST00000379390 GABPAQ06546 454 aa29.03■■■□□ 2.24
TM6SF1-204ENST00000379390 RNF20Q5VTR2 975 aa29.03■■■□□ 2.24
TM6SF1-204ENST00000379390 TRIM34Q9BYJ4 488 aa29.03■■■□□ 2.24
TM6SF1-204ENST00000379390 FZD1Q9UP38 647 aa29.03■■■□□ 2.24
TM6SF1-204ENST00000379390 C16orf86Q6ZW13 317 aa29.02■■■□□ 2.24
TM6SF1-204ENST00000379390 RASEFQ8IZ41 740 aa29.02■■■□□ 2.24
TM6SF1-204ENST00000379390 UPF2Q9HAU5 1272 aaKnown RBP29.02■■■□□ 2.24
TM6SF1-204ENST00000379390 MCCP23508 829 aa29.02■■■□□ 2.24
TM6SF1-204ENST00000379390 SUPT20HL1Q3ZLR7 823 aa29.02■■■□□ 2.24
TM6SF1-204ENST00000379390 FOXP4Q8IVH2 680 aaPredicted RBP29.02■■■□□ 2.24
TM6SF1-204ENST00000379390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.02■■■□□ 2.24
TM6SF1-204ENST00000379390 PAPPA2Q9BXP8 1791 aa29.01■■■□□ 2.23
TM6SF1-204ENST00000379390 PRDM1O75626 825 aa29.01■■■□□ 2.23
TM6SF1-204ENST00000379390 SLC3A2P08195 630 aaKnown RBP29.01■■■□□ 2.23
TM6SF1-204ENST00000379390 AKNAD1Q5T1N1 836 aa29.01■■■□□ 2.23
TM6SF1-204ENST00000379390 ZNF408Q9H9D4 720 aa29.01■■■□□ 2.23
TM6SF1-204ENST00000379390 HERC5Q9UII4 1024 aaKnown RBP29.01■■■□□ 2.23
TM6SF1-204ENST00000379390 NEDD4P46934 1319 aa29■■■□□ 2.23
TM6SF1-204ENST00000379390 ITGBL1O95965 494 aaPredicted RBP29■■■□□ 2.23
TM6SF1-204ENST00000379390 CDK8P49336 464 aa29■■■□□ 2.23
TM6SF1-204ENST00000379390 PRKG1Q13976 671 aa29■■■□□ 2.23
TM6SF1-204ENST00000379390 STOX1Q6ZVD7 989 aa29■■■□□ 2.23
TM6SF1-204ENST00000379390 METTL16Q86W50 562 aaKnown RBP29■■■□□ 2.23
TM6SF1-204ENST00000379390 TOMM70O94826 608 aa28.99■■■□□ 2.23
TM6SF1-204ENST00000379390 SMC1BQ8NDV3 1235 aa28.99■■■□□ 2.23
TM6SF1-204ENST00000379390 STAG1Q8WVM7 1258 aa28.99■■■□□ 2.23
TM6SF1-204ENST00000379390 HOOK2Q96ED9 719 aa28.99■■■□□ 2.23
TM6SF1-204ENST00000379390 TOMM22Q9NS69 142 aa28.99■■■□□ 2.23
TM6SF1-204ENST00000379390 SNX14Q9Y5W7 946 aa28.99■■■□□ 2.23
TM6SF1-204ENST00000379390 DOCK1Q14185 1865 aa28.99■■■□□ 2.23
TM6SF1-204ENST00000379390 ZKSCAN1P17029 563 aaPredicted RBP28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 SHMT1P34896 483 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 NF2P35240 595 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 PDE4BQ07343 736 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 DCAF15Q66K64 600 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 MFSD6Q6ZSS7 791 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 E7EWF7 191 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 TBC1D12O60347 775 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 RRP12Q5JTH9 1297 aaKnown RBP28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 RBM46Q8TBY0 533 aaKnown RBP28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 C22orf23Q9BZE7 217 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 SWAP70Q9UH65 585 aa28.98■■■□□ 2.23
TM6SF1-204ENST00000379390 MAP3K10Q02779 954 aa28.97■■■□□ 2.23
TM6SF1-204ENST00000379390 KCNB2Q92953 911 aa28.97■■■□□ 2.23
TM6SF1-204ENST00000379390 RNF41Q9H4P4 317 aaPredicted RBP28.97■■■□□ 2.23
TM6SF1-204ENST00000379390 MKNK2Q9HBH9 465 aa28.97■■■□□ 2.23
TM6SF1-204ENST00000379390 GREB1LQ9C091 1923 aaPredicted RBP28.96■■■□□ 2.23
TM6SF1-204ENST00000379390 RASA1P20936 1047 aa28.95■■■□□ 2.23
TM6SF1-204ENST00000379390 ADCK5Q3MIX3 580 aa28.95■■■□□ 2.23
TM6SF1-204ENST00000379390 NKX2-3Q8TAU0 364 aa28.95■■■□□ 2.23
TM6SF1-204ENST00000379390 FGRP09769 529 aa28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 RRP1BQ14684 758 aaKnown RBP28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 ZNF341Q9BYN7 854 aa28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 ZNF287Q9HBT7 754 aa28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 B4E1Z4 1266 aa28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 ORC4O43929 436 aa28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 COL9A3Q14050 684 aaPredicted RBP28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 SHROOM1Q2M3G4 852 aaPredicted RBP28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 TSGA10IPQ3SY00 556 aa28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 TATDN1Q6P1N9 297 aa28.94■■■□□ 2.22
TM6SF1-204ENST00000379390 PHF20L1A8MW92 1017 aa28.93■■■□□ 2.22
TM6SF1-204ENST00000379390 PPP1R12BO60237 982 aaPredicted RBP28.93■■■□□ 2.22
TM6SF1-204ENST00000379390 CELF2O95319 508 aaKnown RBP28.93■■■□□ 2.22
TM6SF1-204ENST00000379390 PCP11498 1178 aaKnown RBP28.93■■■□□ 2.22
TM6SF1-204ENST00000379390 TTLL12Q14166 644 aaPredicted RBP28.93■■■□□ 2.22
TM6SF1-204ENST00000379390 MOB2Q70IA6 237 aa28.93■■■□□ 2.22
TM6SF1-204ENST00000379390 TBC1D32Q96NH3 1257 aa28.93■■■□□ 2.22
TM6SF1-204ENST00000379390 WRNIP1Q96S55 665 aa28.93■■■□□ 2.22
TM6SF1-204ENST00000379390 RANBP6O60518 1105 aaKnown RBP28.92■■■□□ 2.22
TM6SF1-204ENST00000379390 USP2O75604 605 aaPredicted RBP28.92■■■□□ 2.22
TM6SF1-204ENST00000379390 GDF11O95390 407 aa28.92■■■□□ 2.22
TM6SF1-204ENST00000379390 CERKLQ49MI3 558 aaPredicted RBP28.92■■■□□ 2.22
TM6SF1-204ENST00000379390 CNNM2Q9H8M5 875 aa28.92■■■□□ 2.22
TM6SF1-204ENST00000379390 TAOK2Q9UL54 1235 aa28.92■■■□□ 2.22
TM6SF1-204ENST00000379390 ANGEL1Q9UNK9 670 aaKnown RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms