RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 NAPGQ99747 312 aaPredicted RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 PRR36Q9H6K5 1346 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 CALRP27797 417 aaKnown RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 KRT9P35527 623 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 ACTN2P35609 894 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 NONOQ15233 471 aaKnown RBP eCLIP12.68□□□□□ -0.38
RPGR-203ENST00000378505 KRT25Q7Z3Z0 450 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 LZTS2Q9BRK4 669 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 XPO4Q9C0E2 1151 aaKnown RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 PFKFB1P16118 471 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 ADD1P35611 737 aaKnown RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 TTLL12Q14166 644 aaPredicted RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 LRRC24Q50LG9 513 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 CDK12Q9NYV4 1490 aaPredicted RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 CMA1P23946 247 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 GIGYF2Q6Y7W6 1299 aaKnown RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 HDXQ7Z353 690 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 NUP58Q9BVL2 599 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 CARD6Q9BX69 1037 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 TFCP2L1Q9NZI6 479 aa12.68□□□□□ -0.38
RPGR-203ENST00000378505 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
RPGR-203ENST00000378505 ROBO2Q9HCK4 1378 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 UBE2Q2Q8WVN8 375 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 NOSTRINQ8IVI9 506 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 GPCPD1Q9NPB8 672 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 GGA1Q9UJY5 639 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 PHACTR2O75167 634 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 TXKP42681 527 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 TNNC1P63316 161 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 PPARAQ07869 468 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 IFNL3Q8IZI9 196 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 ARFGAP2Q8N6H7 521 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
RPGR-203ENST00000378505 U2AF2P26368 475 aaKnown RBP eCLIP12.66□□□□□ -0.383e-6■■□□□ 13.6
RPGR-203ENST00000378505 RPS8P62241 208 aaKnown RBP12.66□□□□□ -0.38
RPGR-203ENST00000378505 MPHOSPH6Q99547 160 aaKnown RBP12.66□□□□□ -0.38
RPGR-203ENST00000378505 RSPH14Q9UHP6 348 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 PTCH1Q13635 1447 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 PDIA3P30101 505 aaKnown RBP12.66□□□□□ -0.38
RPGR-203ENST00000378505 ATRIPQ8WXE1 791 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 CCNT1O60563 726 aaKnown RBP12.66□□□□□ -0.38
RPGR-203ENST00000378505 WDHD1O75717 1129 aaPredicted RBP12.66□□□□□ -0.38
RPGR-203ENST00000378505 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
RPGR-203ENST00000378505 TFAP4Q01664 338 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 UBE4AQ14139 1066 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 VWA3BQ502W6 1294 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 CCDC77Q9BR77 488 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 VPS18Q9P253 973 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 LRWD1Q9UFC0 647 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 KIF1BO60333 1816 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 ADCY9O60503 1353 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 UBE3CQ15386 1083 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 GIMAP7Q8NHV1 300 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 MRFAP1L1Q96HT8 127 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 IMPG2Q9BZV3 1241 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 VEZTQ9HBM0 779 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 SERTAD1Q9UHV2 236 aa12.66□□□□□ -0.38
RPGR-203ENST00000378505 USP17L12C9JPN9 530 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 USP17L21D6R901 530 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 CETN3O15182 167 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 CYP21A2P08686 494 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 HAUS3Q68CZ6 603 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 FANCBQ8NB91 859 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 PCDHA7Q9UN72 937 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 ZMYM6O95789 1325 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 RBM6P78332 1123 aaKnown RBP12.65□□□□□ -0.38
RPGR-203ENST00000378505 MTX1Q13505 466 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 RAPGEF1Q13905 1077 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
RPGR-203ENST00000378505 CIAO1O76071 339 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 TCHPQ9BT92 498 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
RPGR-203ENST00000378505 hCG_1642624A0A1W2PR95 340 aa12.65□□□□□ -0.39
RPGR-203ENST00000378505 IBSPP21815 317 aaPredicted RBP12.65□□□□□ -0.39
RPGR-203ENST00000378505 PNOCQ13519 176 aa12.65□□□□□ -0.39
RPGR-203ENST00000378505 TLR7Q9NYK1 1049 aaKnown RBP12.65□□□□□ -0.39
RPGR-203ENST00000378505 A0A1W2PQ27 194 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 A0A1W2PQ64 194 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 A0A1W2PQD8 194 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 SCRN1Q12765 414 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 ELF2Q15723 593 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
RPGR-203ENST00000378505 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
RPGR-203ENST00000378505 MAST3O60307 1309 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 PDE8BO95263 885 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 CFAP58Q5T655 872 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 NBPF11Q86T75 865 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
RPGR-203ENST00000378505 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 STAMQ92783 540 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms