RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
TPM2-204ENST00000378300 KDM4AO75164 1064 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 EPS15P42566 896 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 TRDNQ13061 729 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 BECN1Q14457 450 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 SPDYE2Q495Y8 402 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 Q6ZUG5 572 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
TPM2-204ENST00000378300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
TPM2-204ENST00000378300 DDTLA6NHG4 134 aaPredicted RBP16.64■□□□□ 0.25
TPM2-204ENST00000378300 PRC1O43663 620 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 FGRP09769 529 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 SPRYD3Q8NCJ5 442 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 RNF41Q9H4P4 317 aaPredicted RBP16.64■□□□□ 0.25
TPM2-204ENST00000378300 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 MCM5P33992 734 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 AMOTL1Q8IY63 956 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 TRPM4Q8TD43 1214 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 CNNM2Q9H8M5 875 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
TPM2-204ENST00000378300 LARGE1O95461 756 aa16.63■□□□□ 0.25
TPM2-204ENST00000378300 KIF4BQ2VIQ3 1234 aa16.63■□□□□ 0.25
TPM2-204ENST00000378300 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
TPM2-204ENST00000378300 KRT23Q9C075 422 aa16.63■□□□□ 0.25
TPM2-204ENST00000378300 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
TPM2-204ENST00000378300 CNTNAP1P78357 1384 aa16.63■□□□□ 0.25
TPM2-204ENST00000378300 H7C1D1 291 aa16.62■□□□□ 0.25
TPM2-204ENST00000378300 FAM47AQ5JRC9 791 aa16.62■□□□□ 0.25
TPM2-204ENST00000378300 BRF1Q92994 677 aa16.62■□□□□ 0.25
TPM2-204ENST00000378300 ALDH8A1Q9H2A2 487 aaPredicted RBP16.62■□□□□ 0.25
TPM2-204ENST00000378300 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
TPM2-204ENST00000378300 SIPA1L1O43166 1804 aa16.62■□□□□ 0.25
TPM2-204ENST00000378300 MYO1BO43795 1136 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 ORC4O43929 436 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 RANBP6O60518 1105 aaKnown RBP16.61■□□□□ 0.25
TPM2-204ENST00000378300 ENTPD3O75355 529 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
TPM2-204ENST00000378300 SLC3A2P08195 630 aaKnown RBP16.61■□□□□ 0.25
TPM2-204ENST00000378300 CDK8P49336 464 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 MMP14P50281 582 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 C16orf86Q6ZW13 317 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 TTC6Q86TZ1 520 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
TPM2-204ENST00000378300 CDAN1Q8IWY9 1227 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 TMX3Q96JJ7 454 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 FAM196BA6NMK8 535 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 HIRAP54198 1017 aaPredicted RBP16.61■□□□□ 0.25
TPM2-204ENST00000378300 FGD1P98174 961 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 GABPAQ06546 454 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 PDE4BQ07343 736 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 ESR2Q92731 530 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 TMEM39BQ9GZU3 492 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 LIMCH1Q9UPQ0 1083 aa16.61■□□□□ 0.25
TPM2-204ENST00000378300 PCP11498 1178 aaKnown RBP16.6■□□□□ 0.25
TPM2-204ENST00000378300 RASA1P20936 1047 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 ME3Q16798 604 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 DNAJC18Q9H819 358 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 MKNK2Q9HBH9 465 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 WDR19Q8NEZ3 1342 aa16.6■□□□□ 0.25
TPM2-204ENST00000378300 NMT2O60551 498 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 MCM2P49736 904 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 IL27Q8NEV9 243 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 FAM151AQ8WW52 585 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 DHX36Q9H2U1 1008 aaKnown RBP16.59■□□□□ 0.25
TPM2-204ENST00000378300 SERPINB13Q9UIV8 391 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 ATRNL1Q5VV63 1379 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 SH2B2O14492 632 aaPredicted RBP16.59■□□□□ 0.25
TPM2-204ENST00000378300 DTNBO60941 627 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 HLA-DOAP06340 250 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 ANKRD1Q15327 319 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 BRPF3Q9ULD4 1205 aa16.59■□□□□ 0.25
TPM2-204ENST00000378300 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
TPM2-204ENST00000378300 ANGEL2Q5VTE6 544 aaKnown RBP16.58■□□□□ 0.24
TPM2-204ENST00000378300 FBXL16Q8N461 479 aa16.58■□□□□ 0.24
TPM2-204ENST00000378300 NECAB1Q8N987 351 aa16.58■□□□□ 0.24
TPM2-204ENST00000378300 CSRNP1Q96S65 589 aa16.58■□□□□ 0.24
TPM2-204ENST00000378300 EHD4Q9H223 541 aa16.58■□□□□ 0.24
TPM2-204ENST00000378300 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
TPM2-204ENST00000378300 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.24
TPM2-204ENST00000378300 GLTPD2A6NH11 291 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 TSPY2A6NKD2 308 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 LMOD1P29536 600 aaPredicted RBP16.57■□□□□ 0.24
TPM2-204ENST00000378300 SHMT1P34896 483 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 TFAP4Q01664 338 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 ST3GAL1Q11201 340 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 STK3Q13188 491 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 RASA3Q14644 834 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 TMEM67Q5HYA8 995 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 FAM83AQ86UY5 434 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 TMEM87BQ96K49 555 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms