RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 UBE3CQ15386 1083 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 ZNF274Q96GC6 653 aaPredicted RBP20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 SELENOOQ9BVL4 669 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 ERVV-1B6SEH8 477 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 KIF5AQ12840 1032 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 UNC5CLQ8IV45 518 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 KRT86O43790 486 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 SMTNP53814 917 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 BRDTQ58F21 947 aaPredicted RBP20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 ZNF654Q8IZM8 581 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 HEG1Q9ULI3 1381 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 BCS1LQ9Y276 419 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 XDHP47989 1333 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 PTGS1P23219 599 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 FAM47AQ5JRC9 791 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 FRMD4BQ9Y2L6 1034 aa20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 LUC7L2Q9Y383 392 aaKnown RBP20.12■□□□□ 0.81
CLSTN1-202ENST00000377298 KIF4AO95239 1232 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 PDE4DQ08499 809 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 OTUD7BQ6GQQ9 843 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 CHURC1Q8WUH1 139 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 IFNKQ9P0W0 207 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 HSPD1P10809 573 aaKnown RBP20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 RXRBP28702 533 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 STAP2Q9UGK3 403 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 TRAF5O00463 557 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 KRT27Q7Z3Y8 459 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 FAM212AQ96EL1 285 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 ATG3Q9NT62 314 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 LRWD1Q9UFC0 647 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 BEGAINQ9BUH8 593 aa20.11■□□□□ 0.81
CLSTN1-202ENST00000377298 ERICH4A6NGS2 130 aa20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 CHMP2AO43633 222 aa20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 DDX12PQ92771 950 aa20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 TRIM37O94972 964 aa20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 PCP11498 1178 aaKnown RBP20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 MSANTD4Q8NCY6 345 aa20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 EPB41P11171 864 aaKnown RBP20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 ARID5AQ03989 594 aa20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 CPXCR1Q8N123 301 aa20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 REXO1Q8N1G1 1221 aaKnown RBP20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 GTF3C6Q969F1 213 aa20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 ZSCAN10Q96SZ4 725 aaPredicted RBP20.1■□□□□ 0.81
CLSTN1-202ENST00000377298 CNGA4Q8IV77 575 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 LEO1Q8WVC0 666 aaPredicted RBP20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 ARHGEF35A5YM69 484 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 DNAI1Q9UI46 699 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 CEP83Q9Y592 693 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 ZNF521Q96K83 1311 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 NOLC1Q14978 699 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■□□□ 12
CLSTN1-202ENST00000377298 NSMFQ6X4W1 530 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 IFT74Q96LB3 600 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 AS3MTQ9HBK9 375 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 ZKSCAN5Q9Y2L8 839 aa20.09■□□□□ 0.81
CLSTN1-202ENST00000377298 CTAGE15A4D2H0 777 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 CTAGE8P0CG41 777 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 MYCLP12524 364 aaPredicted RBP20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 PHKA1P46020 1223 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 CTAGE6Q86UF2 777 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 CTAGE4Q8IX94 777 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 CLSTN2Q9H4D0 955 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 CDC42BPAQ5VT25 1732 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 SHTN1A0MZ66 631 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 POLR2DO15514 142 aaKnown RBP20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 SERPINB2P05120 415 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 PTH1RQ03431 593 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 MCTP2Q6DN12 878 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 SNX29Q8TEQ0 813 aa20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 ZNF830Q96NB3 372 aaPredicted RBP20.08■□□□□ 0.81
CLSTN1-202ENST00000377298 BBOX1O75936 387 aa20.08■□□□□ 0.8
CLSTN1-202ENST00000377298 PUS3Q9BZE2 481 aaKnown RBP20.08■□□□□ 0.8
CLSTN1-202ENST00000377298 ZMYND15Q9H091 742 aa20.08■□□□□ 0.8
CLSTN1-202ENST00000377298 BTDP43251 543 aa20.08■□□□□ 0.8
CLSTN1-202ENST00000377298 DCAF15Q66K64 600 aa20.08■□□□□ 0.8
CLSTN1-202ENST00000377298 JAK2O60674 1132 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 FAM173BQ6P4H8 233 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 KIAA0825Q8IV33 1275 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 PIGBQ92521 554 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 SEC62Q99442 399 aaKnown RBP20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 EXOC7Q9UPT5 735 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 CFBP00751 764 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 MAP2K1Q02750 393 aaPredicted RBP20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 CALCRLQ16602 461 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 DOK7Q18PE1 504 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 USH1GQ495M9 461 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 NCAPH2Q6IBW4 605 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 MLKLQ8NB16 471 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 ATP8A2Q9NTI2 1148 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 DBNLQ9UJU6 430 aaKnown RBP20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 KCNJ14Q9UNX9 436 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 ATP10DQ9P241 1426 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 FGAP02671 866 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 GPR162Q16538 588 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 DCAF17Q5H9S7 520 aaPredicted RBP20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 SDR42E1Q8WUS8 393 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 FNBP1Q96RU3 617 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 ZSWIM4Q9H7M6 989 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 NOP56O00567 594 aaKnown RBP20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 PPEF1O14829 653 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms