RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 DACT1Q9NYF0 836 aa20.36■□□□□ 0.85
NKX2-2-201ENST00000377142 NT5C2P49902 561 aa20.35■□□□□ 0.85
NKX2-2-201ENST00000377142 TRIM29Q14134 588 aa20.35■□□□□ 0.85
NKX2-2-201ENST00000377142 MAP3K11Q16584 847 aa20.35■□□□□ 0.85
NKX2-2-201ENST00000377142 RNF214Q8ND24 703 aa20.35■□□□□ 0.85
NKX2-2-201ENST00000377142 TBC1D16Q8TBP0 767 aa20.35■□□□□ 0.85
NKX2-2-201ENST00000377142 NOL10Q9BSC4 688 aaKnown RBP20.35■□□□□ 0.85
NKX2-2-201ENST00000377142 FTOQ9C0B1 505 aaKnown RBP eCLIP20.35■□□□□ 0.85
NKX2-2-201ENST00000377142 BAG3O95817 575 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 MYSM1Q5VVJ2 828 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 SP8Q8IXZ3 490 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 TRIM22Q8IYM9 498 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 TRIM44Q96DX7 344 aaPredicted RBP20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 SLC26A6Q9BXS9 759 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 POLR3EQ9NVU0 708 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 SMIM22K7EJ46 135 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 YEATS4O95619 227 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 KRT40Q6A162 431 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 ENAHQ8N8S7 591 aaPredicted RBP20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 CLSTN2Q9H4D0 955 aa20.34■□□□□ 0.85
NKX2-2-201ENST00000377142 MROH7-TTC4A0A0A0MT08 1334 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 COL11A2P13942 1736 aaPredicted RBP20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 RXRBP28702 533 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 PPP4CP60510 307 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 UVSSAQ2YD98 709 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 FAM43AQ8N2R8 423 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 FANCBQ8NB91 859 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 AIFM3Q96NN9 605 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 TNMDQ9H2S6 317 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 GJB4Q9NTQ9 266 aa20.33■□□□□ 0.85
NKX2-2-201ENST00000377142 KIF28PB7ZC32 967 aa20.33■□□□□ 0.84
NKX2-2-201ENST00000377142 CCDC192P0DO97 292 aa20.33■□□□□ 0.84
NKX2-2-201ENST00000377142 PDE4BQ07343 736 aa20.33■□□□□ 0.84
NKX2-2-201ENST00000377142 IFIT1BQ5T764 474 aaKnown RBP20.33■□□□□ 0.84
NKX2-2-201ENST00000377142 POLLQ9UGP5 575 aa20.33■□□□□ 0.84
NKX2-2-201ENST00000377142 MYH6P13533 1939 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 CDK5RAP2Q96SN8 1893 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 NR1I2O75469 434 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 POLR3DP05423 398 aaPredicted RBP20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 NPR1P16066 1061 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 USP5P45974 858 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 RBM43Q6ZSC3 357 aaKnown RBP20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 KCNG4Q8TDN1 519 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 TBC1D22AQ8WUA7 517 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 PDLIM2Q96JY6 352 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 ATP6V0A2Q9Y487 856 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 ROBO3Q96MS0 1386 aa20.32■□□□□ 0.84
NKX2-2-201ENST00000377142 PRDM1O75626 825 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 ME1P48163 572 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 CATIPQ7Z7H3 387 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 NUP133Q8WUM0 1156 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 MCM9Q9NXL9 1143 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 MKRN1Q9UHC7 482 aaKnown RBP20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 C6orf229H3BNL8 230 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 DEXIO95424 95 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 CALM1P0DP23 149 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 CALM2P0DP24 149 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 CALM3P0DP25 149 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 SRGNP10124 158 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 PDE6BP35913 854 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 STK38Q15208 465 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 DIXDC1Q155Q3 683 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 AMOTL1Q8IY63 956 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 LINC00301Q8NCQ3 95 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 PARP3Q9Y6F1 533 aa20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 DDX60LQ5H9U9 1706 aaKnown RBP20.31■□□□□ 0.84
NKX2-2-201ENST00000377142 DDAH1O94760 285 aa20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 GNL2Q13823 731 aaKnown RBP20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 GRIK5Q16478 980 aa20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 CCDC73Q6ZRK6 1079 aa20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 NBPF11Q86T75 865 aa20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 CCAR1Q8IX12 1150 aaKnown RBP20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 CRACR2BQ8N4Y2 399 aaPredicted RBP20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 SH3RF3Q8TEJ3 882 aaPredicted RBP20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 RTFDC1Q9BY42 306 aaPredicted RBP20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 RBM28Q9NW13 759 aaKnown RBP20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 CYP2D6P10635 497 aa20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 SLF2Q8IX21 1173 aa20.3■□□□□ 0.84
NKX2-2-201ENST00000377142 FAM205AQ6ZU69 1335 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 A0A1W2PQ27 194 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 A0A1W2PQ64 194 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 A0A1W2PQD8 194 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 MMP10P09238 476 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 U2AF2P26368 475 aaKnown RBP eCLIP20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 CAMK4Q16566 473 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 C12orf60Q5U649 245 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 ADALQ6DHV7 355 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 RNF26Q9BY78 433 aaPredicted RBP20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 CLIC4Q9Y696 253 aa20.29■□□□□ 0.84
NKX2-2-201ENST00000377142 USP17L8P0C7I0 530 aa20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 PLCG2P16885 1265 aa20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 SF3A1Q15459 793 aaKnown RBP20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 MFSD14BQ5SR56 506 aa20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 ANO1Q5XXA6 986 aa20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 SPTLC2O15270 562 aa20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 CTAGE5O15320 804 aa20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 FAM160A1Q05DH4 1040 aa20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 SAFBQ15424 915 aaKnown RBP eCLIP20.28■□□□□ 0.84
NKX2-2-201ENST00000377142 COA1Q9GZY4 146 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms