RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 RPS6KA4O75676 772 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 TIMP2P16035 220 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 SMPD1P17405 629 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 PTGIRP43119 386 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 PIP4K2AP48426 406 aaPredicted RBP7.15□□□□□ -1.26
SSX1-201ENST00000376919 PRR20EP86478 221 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 PRR20CP86479 221 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 PRR20DP86480 221 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 PRR20BP86481 221 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 PRR20AP86496 221 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 SMIM5Q71RC9 77 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 USP48Q86UV5 1035 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 ATCAYQ86WG3 371 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 COL23A1Q86Y22 540 aaPredicted RBP7.15□□□□□ -1.26
SSX1-201ENST00000376919 WDR63Q8IWG1 891 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 CNKSR1Q969H4 720 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 CSRNP1Q96S65 589 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 CFHR5Q9BXR6 569 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 OSBPL2Q9H1P3 480 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 PIF1Q9H611 641 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 ZFAND3Q9H8U3 227 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 LRFN2Q9ULH4 789 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 IL16Q14005 1332 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 FANCIQ9NVI1 1328 aa7.15□□□□□ -1.26
SSX1-201ENST00000376919 CHL1O00533 1208 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 STK10O94804 968 aaKnown RBP7.14□□□□□ -1.27
SSX1-201ENST00000376919 A1BGP04217 495 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 CTSHP09668 335 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 EIF4BP23588 611 aaKnown RBP7.14□□□□□ -1.27
SSX1-201ENST00000376919 IL6STP40189 918 aaPredicted RBP7.14□□□□□ -1.27
SSX1-201ENST00000376919 PTPN12Q05209 780 aaKnown RBP7.14□□□□□ -1.27
SSX1-201ENST00000376919 SOS1Q07889 1333 aaPredicted RBP7.14□□□□□ -1.27
SSX1-201ENST00000376919 CLN3Q13286 438 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 KRT24Q2M2I5 525 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 ZNF394Q53GI3 561 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 DUSP27Q5VZP5 1158 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 EGFLAMQ63HQ2 1017 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 INTS5Q6P9B9 1019 aaKnown RBP7.14□□□□□ -1.27
SSX1-201ENST00000376919 TRIM67Q6ZTA4 783 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 HS2ST1Q7LGA3 356 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 SLC16A10Q8TF71 515 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 YTHDC1Q96MU7 727 aaKnown RBP7.14□□□□□ -1.27
SSX1-201ENST00000376919 STK31Q9BXU1 1019 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 PDGFDQ9GZP0 370 aaPredicted RBP7.14□□□□□ -1.27
SSX1-201ENST00000376919 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.14□□□□□ -1.27
SSX1-201ENST00000376919 ZNF652Q9Y2D9 606 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 PCDHGB7Q9Y5F8 929 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 USP16Q9Y5T5 823 aa7.14□□□□□ -1.27
SSX1-201ENST00000376919 ANKRD36CQ5JPF3 1778 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 ERBB4Q15303 1308 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 USP42Q9H9J4 1324 aaKnown RBP7.13□□□□□ -1.27
SSX1-201ENST00000376919 CDK2AP1O14519 115 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 ZBTB39O15060 712 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 PDGFAP04085 211 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 NEFLP07196 543 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 HOXB7P09629 217 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 PCSK2P16519 638 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 RACK1P63244 317 aaKnown RBP7.13□□□□□ -1.27
SSX1-201ENST00000376919 DNM1Q05193 864 aaKnown RBP7.13□□□□□ -1.27
SSX1-201ENST00000376919 AIMP1Q12904 312 aaKnown RBP7.13□□□□□ -1.27
SSX1-201ENST00000376919 TLR1Q15399 786 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 TWISTNBQ3B726 338 aaPredicted RBP7.13□□□□□ -1.27
SSX1-201ENST00000376919 TBCELQ5QJ74 424 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 CCDC30Q5VVM6 783 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 USPL1Q5W0Q7 1092 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 BICDL1Q6ZP65 573 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 EDEM1Q92611 657 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 AGBL1Q96MI9 1066 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 SRP68Q9UHB9 627 aaKnown RBP7.13□□□□□ -1.27
SSX1-201ENST00000376919 ARFGEF2Q9Y6D5 1785 aa7.13□□□□□ -1.27
SSX1-201ENST00000376919 FGRP09769 529 aa7.12□□□□□ -1.27
SSX1-201ENST00000376919 NLGN1Q8N2Q7 840 aa7.12□□□□□ -1.27
SSX1-201ENST00000376919 FHDC1Q9C0D6 1143 aaPredicted RBP7.12□□□□□ -1.27
SSX1-201ENST00000376919 DNAJC25Q9H1X3 360 aa7.12□□□□□ -1.27
SSX1-201ENST00000376919 CHPF2Q9P2E5 772 aa7.12□□□□□ -1.27
SSX1-201ENST00000376919 DBF4Q9UBU7 674 aaPredicted RBP7.12□□□□□ -1.27
SSX1-201ENST00000376919 PARP3Q9Y6F1 533 aa7.12□□□□□ -1.27
SSX1-201ENST00000376919 AFDNP55196 1824 aaKnown RBP7.11□□□□□ -1.27
SSX1-201ENST00000376919 EIF1AYO14602 144 aaKnown RBP7.11□□□□□ -1.27
SSX1-201ENST00000376919 TCERG1O14776 1098 aaKnown RBP7.11□□□□□ -1.27
SSX1-201ENST00000376919 DDX58O95786 925 aaKnown RBP7.11□□□□□ -1.27
SSX1-201ENST00000376919 ANXA1P04083 346 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 MMP10P09238 476 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 ZNF853P0CG23 659 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 ZAP70P43403 619 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 RELBQ01201 579 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 CENPCQ03188 943 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 EXOSC9Q06265 439 aaKnown RBP7.11□□□□□ -1.27
SSX1-201ENST00000376919 FAM26DQ5JW98 314 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 ZNF746Q6NUN9 644 aaPredicted RBP7.11□□□□□ -1.27
SSX1-201ENST00000376919 AMIGO3Q86WK7 504 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 MCF2L2Q86YR7 1114 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 MEIOBQ8N635 442 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 NBPF15Q8N660 670 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 C8orf58Q8NAV2 365 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 HPS1Q92902 700 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
SSX1-201ENST00000376919 NARFQ9UHQ1 456 aa7.11□□□□□ -1.27
SSX1-201ENST00000376919 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms