RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ADAMTSL1Q8N6G6 1762 aa14.73□□□□□ -0.05
CLCN6-206ENST00000376496 GPR75-ASB3A0A0A6YYF3 556 aa14.73□□□□□ -0.05
CLCN6-206ENST00000376496 LIFRP42702 1097 aa14.73□□□□□ -0.05
CLCN6-206ENST00000376496 CNKSR1Q969H4 720 aa14.73□□□□□ -0.05
CLCN6-206ENST00000376496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLCN6-206ENST00000376496 ATP6V1DQ9Y5K8 247 aa14.73□□□□□ -0.05
CLCN6-206ENST00000376496 DPEP1P16444 411 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 RHBDL3P58872 404 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 PPP4CP60510 307 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 SART3Q15020 963 aaKnown RBP14.72□□□□□ -0.05
CLCN6-206ENST00000376496 SEC23AQ15436 765 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 TTC6Q86TZ1 520 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 KIAA0825Q8IV33 1275 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 TBC1D22AQ8WUA7 517 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 C7orf43Q8WVR3 580 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 ZSCAN10Q96SZ4 725 aaPredicted RBP14.72□□□□□ -0.05
CLCN6-206ENST00000376496 ARPP21Q9UBL0 812 aaPredicted RBP14.72□□□□□ -0.05
CLCN6-206ENST00000376496 KIAA1551Q9HCM1 1747 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 C12orf60Q5U649 245 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 ZNF654Q8IZM8 581 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 PPP1R1BQ9UD71 204 aaPredicted RBP14.72□□□□□ -0.05
CLCN6-206ENST00000376496 hCG_1642624A0A1W2PR95 340 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 DHX16O60231 1041 aaKnown RBP14.72□□□□□ -0.05
CLCN6-206ENST00000376496 POLR3DP05423 398 aaPredicted RBP14.72□□□□□ -0.05
CLCN6-206ENST00000376496 SLURP2P0DP57 97 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 NTRK3Q16288 839 aa14.72□□□□□ -0.05
CLCN6-206ENST00000376496 SCN9AQ15858 1988 aa14.71□□□□□ -0.05
CLCN6-206ENST00000376496 ECE2O60344 883 aa14.71□□□□□ -0.05
CLCN6-206ENST00000376496 GUCY1A2P33402 732 aa14.71□□□□□ -0.05
CLCN6-206ENST00000376496 C8orf76Q96K31 380 aa14.71□□□□□ -0.05
CLCN6-206ENST00000376496 EYA3Q99504 573 aa14.71□□□□□ -0.05
CLCN6-206ENST00000376496 SLC26A6Q9BXS9 759 aa14.71□□□□□ -0.05
CLCN6-206ENST00000376496 ZBTB22O15209 634 aa14.71□□□□□ -0.06
CLCN6-206ENST00000376496 SBK1Q52WX2 424 aa14.71□□□□□ -0.06
CLCN6-206ENST00000376496 SYNE3Q6ZMZ3 975 aa14.71□□□□□ -0.06
CLCN6-206ENST00000376496 ILDR1Q86SU0 546 aaPredicted RBP14.71□□□□□ -0.06
CLCN6-206ENST00000376496 MTMR7Q9Y216 660 aa14.71□□□□□ -0.06
CLCN6-206ENST00000376496 FLT1P17948 1338 aa14.71□□□□□ -0.06
CLCN6-206ENST00000376496 TSPY2A6NKD2 308 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 CACNB3P54284 484 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 ZSCAN23Q3MJ62 389 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 CDK5RAP2Q96SN8 1893 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 LAMB1P07942 1786 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 USP17L3A6NCW0 530 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 USP17L4A6NCW7 530 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 FGRP09769 529 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 KRT85P78386 507 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 TFAP4Q01664 338 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 RTN1Q16799 776 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 IFIT1BQ5T764 474 aaKnown RBP14.7□□□□□ -0.06
CLCN6-206ENST00000376496 USP17L1Q7RTZ2 530 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 ALG1Q9BT22 464 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 GAKO14976 1311 aa14.7□□□□□ -0.06
CLCN6-206ENST00000376496 KCNA3P22001 575 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 IARSP41252 1262 aaKnown RBP14.69□□□□□ -0.06
CLCN6-206ENST00000376496 DDX4Q9NQI0 724 aaKnown RBP14.69□□□□□ -0.06
CLCN6-206ENST00000376496 KIF28PB7ZC32 967 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 PDE4BQ07343 736 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 IQCA1Q86XH1 822 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 MKNK2Q9HBH9 465 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 QSER1Q2KHR3 1735 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 BAZ2BQ9UIF8 2168 aaKnown RBP14.69□□□□□ -0.06
CLCN6-206ENST00000376496 NAV1Q8NEY1 1877 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 SYCE3A1L190 88 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 PPIP5K2O43314 1243 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 ORC4O43929 436 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 SLC3A2P08195 630 aaKnown RBP14.69□□□□□ -0.06
CLCN6-206ENST00000376496 FANCBQ8NB91 859 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 TMEM87AQ8NBN3 555 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 KIF3AQ9Y496 699 aa14.69□□□□□ -0.06
CLCN6-206ENST00000376496 C10orf71Q711Q0 1435 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 GOLGA6L3A6NEY3 463 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
CLCN6-206ENST00000376496 TTLL6Q8N841 843 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 FBXO18Q8NFZ0 1043 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 PIBF1Q8WXW3 757 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 IL17RBQ9NRM6 502 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 USP40Q9NVE5 1235 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 PLEKHA8P1O95397 391 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 RBM5P52756 815 aaKnown RBP eCLIP14.68□□□□□ -0.068e-6■■■■□ 20.7
CLCN6-206ENST00000376496 PODNQ7Z5L7 613 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 FAM163AQ96GL9 167 aaPredicted RBP14.68□□□□□ -0.06
CLCN6-206ENST00000376496 SPATA32Q96LK8 384 aa14.68□□□□□ -0.06
CLCN6-206ENST00000376496 ZNF277Q9NRM2 450 aaPredicted RBP14.68□□□□□ -0.06
CLCN6-206ENST00000376496 YDJCA8MPS7 323 aa14.67□□□□□ -0.06
CLCN6-206ENST00000376496 NFIAQ12857 509 aa14.67□□□□□ -0.06
CLCN6-206ENST00000376496 RASGRP2Q7LDG7 609 aa14.67□□□□□ -0.06
CLCN6-206ENST00000376496 LEO1Q8WVC0 666 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-206ENST00000376496 PSDA5PKW4 1024 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-206ENST00000376496 DACT2Q5SW24 774 aa14.67□□□□□ -0.06
CLCN6-206ENST00000376496 RCSD1Q6JBY9 416 aa14.67□□□□□ -0.06
CLCN6-206ENST00000376496 CPLX2Q6PUV4 134 aaKnown RBP14.67□□□□□ -0.06
CLCN6-206ENST00000376496 USP28Q96RU2 1077 aa14.67□□□□□ -0.06
CLCN6-206ENST00000376496 ECM29Q5VYK3 1845 aa14.67□□□□□ -0.06
CLCN6-206ENST00000376496 SRCAPQ6ZRS2 3230 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 WDHD1O75717 1129 aaPredicted RBP14.66□□□□□ -0.06
CLCN6-206ENST00000376496 MBD3O95983 291 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 SSRP1Q08945 709 aaKnown RBP14.66□□□□□ -0.06
CLCN6-206ENST00000376496 KRT40Q6A162 431 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms