RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SERPINB13Q9UIV8 391 aa27.16■■□□□ 1.94
HLA-C-202ENST00000376237 PPP2R3BQ9Y5P8 575 aa27.16■■□□□ 1.94
HLA-C-202ENST00000376237 DDTLA6NHG4 134 aaPredicted RBP27.15■■□□□ 1.94
HLA-C-202ENST00000376237 RABEP1Q15276 862 aa27.15■■□□□ 1.94
HLA-C-202ENST00000376237 ADCK5Q3MIX3 580 aa27.15■■□□□ 1.94
HLA-C-202ENST00000376237 SH3BP5LQ7L8J4 393 aa27.15■■□□□ 1.94
HLA-C-202ENST00000376237 DCPSQ96C86 337 aaKnown RBP27.15■■□□□ 1.94
HLA-C-202ENST00000376237 JAKMIP1Q96N16 626 aaKnown RBP27.15■■□□□ 1.94
HLA-C-202ENST00000376237 KRT23Q9C075 422 aa27.15■■□□□ 1.94
HLA-C-202ENST00000376237 DEFB129Q9H1M3 183 aa27.15■■□□□ 1.94
HLA-C-202ENST00000376237 PGAP2Q9UHJ9 254 aa27.15■■□□□ 1.94
HLA-C-202ENST00000376237 SLC4A8Q2Y0W8 1093 aa27.14■■□□□ 1.94
HLA-C-202ENST00000376237 STOX1Q6ZVD7 989 aa27.14■■□□□ 1.94
HLA-C-202ENST00000376237 C16orf86Q6ZW13 317 aa27.14■■□□□ 1.94
HLA-C-202ENST00000376237 RALYLQ86SE5 291 aaKnown RBP27.14■■□□□ 1.94
HLA-C-202ENST00000376237 CSRNP1Q96S65 589 aa27.14■■□□□ 1.94
HLA-C-202ENST00000376237 SWAP70Q9UH65 585 aa27.14■■□□□ 1.94
HLA-C-202ENST00000376237 LAMA4Q16363 1823 aa27.14■■□□□ 1.93
HLA-C-202ENST00000376237 GABPAQ06546 454 aa27.13■■□□□ 1.93
HLA-C-202ENST00000376237 ZSWIM6Q9HCJ5 1215 aa27.13■■□□□ 1.93
HLA-C-202ENST00000376237 MYH1P12882 1939 aa27.13■■□□□ 1.93
HLA-C-202ENST00000376237 ORC4O43929 436 aa27.12■■□□□ 1.93
HLA-C-202ENST00000376237 BLOC1S2Q6QNY1 142 aa27.12■■□□□ 1.93
HLA-C-202ENST00000376237 METTL16Q86W50 562 aaKnown RBP27.12■■□□□ 1.93
HLA-C-202ENST00000376237 TMEM39BQ9GZU3 492 aa27.12■■□□□ 1.93
HLA-C-202ENST00000376237 RRAGCQ9HB90 399 aa27.12■■□□□ 1.93
HLA-C-202ENST00000376237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.12■■□□□ 1.93
HLA-C-202ENST00000376237 CASTP20810 708 aaKnown RBP27.11■■□□□ 1.93
HLA-C-202ENST00000376237 EAPPQ56P03 285 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-202ENST00000376237 CRACR2BQ8N4Y2 399 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-202ENST00000376237 MKNK2Q9HBH9 465 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 HERC5Q9UII4 1024 aaKnown RBP27.11■■□□□ 1.93
HLA-C-202ENST00000376237 CYP46A1Q9Y6A2 500 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 LAMB1P07942 1786 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 SMIM22K7EJ46 135 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 EVX2Q03828 476 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 RUFY3Q7L099 469 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 SULF1Q8IWU6 871 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 ESR2Q92731 530 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 HOOK2Q96ED9 719 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 DYNLL2Q96FJ2 89 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 TRIM34Q9BYJ4 488 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 TOMM22Q9NS69 142 aa27.11■■□□□ 1.93
HLA-C-202ENST00000376237 CDK8P49336 464 aa27.1■■□□□ 1.93
HLA-C-202ENST00000376237 STK11IPQ8N1F8 1099 aa27.1■■□□□ 1.93
HLA-C-202ENST00000376237 TBC1D12O60347 775 aa27.09■■□□□ 1.93
HLA-C-202ENST00000376237 DHX32Q7L7V1 743 aaKnown RBP27.09■■□□□ 1.93
HLA-C-202ENST00000376237 TEPSINQ96N21 525 aa27.09■■□□□ 1.93
HLA-C-202ENST00000376237 TACC3Q9Y6A5 838 aa27.09■■□□□ 1.93
HLA-C-202ENST00000376237 NEDD4P46934 1319 aa27.09■■□□□ 1.93
HLA-C-202ENST00000376237 MCM5P33992 734 aa27.08■■□□□ 1.93
HLA-C-202ENST00000376237 ZNF444Q8N0Y2 327 aaPredicted RBP27.08■■□□□ 1.93
HLA-C-202ENST00000376237 INCENPQ9NQS7 918 aa27.08■■□□□ 1.93
HLA-C-202ENST00000376237 WDR19Q8NEZ3 1342 aa27.07■■□□□ 1.92
HLA-C-202ENST00000376237 B4E1Z4 1266 aa27.07■■□□□ 1.92
HLA-C-202ENST00000376237 RPS6KB1P23443 525 aa27.07■■□□□ 1.92
HLA-C-202ENST00000376237 NEK4P51957 841 aa27.07■■□□□ 1.92
HLA-C-202ENST00000376237 RRP12Q5JTH9 1297 aaKnown RBP27.07■■□□□ 1.92
HLA-C-202ENST00000376237 MB21D2Q8IYB1 491 aaPredicted RBP27.07■■□□□ 1.92
HLA-C-202ENST00000376237 UPF3BQ9BZI7 483 aaKnown RBP27.07■■□□□ 1.92
HLA-C-202ENST00000376237 MAP3K10Q02779 954 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 MTA3Q9BTC8 594 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 ST18O60284 1047 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 RANBP6O60518 1105 aaKnown RBP27.06■■□□□ 1.92
HLA-C-202ENST00000376237 KDM4AO75164 1064 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 PRDM1O75626 825 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 SUPT20HL1Q3ZLR7 823 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 KRT26Q7Z3Y9 468 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 SLC44A5Q8NCS7 719 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 ZSWIM5Q9P217 1185 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 SCAF8Q9UPN6 1271 aaKnown RBP27.06■■□□□ 1.92
HLA-C-202ENST00000376237 CLEC11AQ9Y240 323 aa27.06■■□□□ 1.92
HLA-C-202ENST00000376237 RBM19Q9Y4C8 960 aaKnown RBP27.06■■□□□ 1.92
HLA-C-202ENST00000376237 EXOSC10Q01780 885 aaKnown RBP27.05■■□□□ 1.92
HLA-C-202ENST00000376237 TATDN1Q6P1N9 297 aa27.05■■□□□ 1.92
HLA-C-202ENST00000376237 CDC37L1Q7L3B6 337 aa27.05■■□□□ 1.92
HLA-C-202ENST00000376237 CCDC17Q96LX7 622 aa27.05■■□□□ 1.92
HLA-C-202ENST00000376237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.05■■□□□ 1.92
HLA-C-202ENST00000376237 NMRK2Q9NPI5 230 aa27.05■■□□□ 1.92
HLA-C-202ENST00000376237 RASA1P20936 1047 aa27.04■■□□□ 1.92
HLA-C-202ENST00000376237 LDHDQ86WU2 507 aa27.04■■□□□ 1.92
HLA-C-202ENST00000376237 ZNF526Q8TF50 670 aaPredicted RBP27.04■■□□□ 1.92
HLA-C-202ENST00000376237 ALDH8A1Q9H2A2 487 aaPredicted RBP27.04■■□□□ 1.92
HLA-C-202ENST00000376237 DNAJC18Q9H819 358 aa27.04■■□□□ 1.92
HLA-C-202ENST00000376237 PDRG1Q9NUG6 133 aa27.04■■□□□ 1.92
HLA-C-202ENST00000376237 TSPY2A6NKD2 308 aa27.03■■□□□ 1.92
HLA-C-202ENST00000376237 SHMT1P34896 483 aa27.03■■□□□ 1.92
HLA-C-202ENST00000376237 DCAF15Q66K64 600 aa27.03■■□□□ 1.92
HLA-C-202ENST00000376237 CDAN1Q8IWY9 1227 aa27.03■■□□□ 1.92
HLA-C-202ENST00000376237 TMEM87BQ96K49 555 aa27.03■■□□□ 1.92
HLA-C-202ENST00000376237 PRC1O43663 620 aa27.02■■□□□ 1.92
HLA-C-202ENST00000376237 CPA1P15085 419 aa27.02■■□□□ 1.92
HLA-C-202ENST00000376237 NBPF12Q5TAG4 269 aaPredicted RBP27.02■■□□□ 1.92
HLA-C-202ENST00000376237 IQCA1Q86XH1 822 aa27.02■■□□□ 1.92
HLA-C-202ENST00000376237 FBXL16Q8N461 479 aa27.02■■□□□ 1.92
HLA-C-202ENST00000376237 TSPY3P0CV98 308 aa27.01■■□□□ 1.91
HLA-C-202ENST00000376237 TSPY8P0CW00 308 aa27.01■■□□□ 1.91
HLA-C-202ENST00000376237 TFAP4Q01664 338 aa27.01■■□□□ 1.91
HLA-C-202ENST00000376237 SART3Q15020 963 aaKnown RBP27.01■■□□□ 1.91
HLA-C-202ENST00000376237 ANKRD1Q15327 319 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 1357.9 ms