RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 TBC1D31Q96DN5 1066 aa15.29■□□□□ 0.04
COL4A1-201ENST00000375820 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
COL4A1-201ENST00000375820 GBP6Q6ZN66 633 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 PPFIBP2Q8ND30 876 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 CALUO43852 315 aaPredicted RBP15.28■□□□□ 0.04
COL4A1-201ENST00000375820 LINS1Q8NG48 757 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 SLC8A3P57103 927 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 ELF2Q15723 593 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 IFT74Q96LB3 600 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 USP26Q9BXU7 913 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 HINFPQ9BQA5 517 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 GPHNQ9NQX3 736 aaPredicted RBP15.28■□□□□ 0.04
COL4A1-201ENST00000375820 TOPBP1Q92547 1522 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 TRAPPC3LQ5T215 181 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 SPOUT1Q5T280 376 aaKnown RBP15.28■□□□□ 0.04
COL4A1-201ENST00000375820 EP400NLQ6ZTU2 488 aa15.28■□□□□ 0.04
COL4A1-201ENST00000375820 RSRC1Q96IZ7 334 aaKnown RBP15.28■□□□□ 0.04
COL4A1-201ENST00000375820 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 CAPN12Q6ZSI9 719 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 LRRC43Q8N309 656 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 ANKRD2Q9GZV1 360 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 IFRD2Q12894 506 aaPredicted RBP15.27■□□□□ 0.04
COL4A1-201ENST00000375820 FAM47AQ5JRC9 791 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 ANO1Q5XXA6 986 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 CYP26C1Q6V0L0 522 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 BUB1BO60566 1050 aaPredicted RBP15.27■□□□□ 0.04
COL4A1-201ENST00000375820 CD19P15391 556 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 MIPOL1Q8TD10 442 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 SNX21Q969T3 373 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 DBNDD2Q9BQY9 259 aa15.27■□□□□ 0.04
COL4A1-201ENST00000375820 FANCCQ00597 558 aa15.27■□□□□ 0.03
COL4A1-201ENST00000375820 CNNM4Q6P4Q7 775 aa15.27■□□□□ 0.03
COL4A1-201ENST00000375820 XAGE2Q96GT9 111 aa15.27■□□□□ 0.03
COL4A1-201ENST00000375820 NDUFAB1O14561 156 aa15.27■□□□□ 0.03
COL4A1-201ENST00000375820 CSPG5O95196 566 aa15.27■□□□□ 0.03
COL4A1-201ENST00000375820 PDE1CQ14123 709 aaPredicted RBP15.27■□□□□ 0.03
COL4A1-201ENST00000375820 LIN9Q5TKA1 542 aa15.27■□□□□ 0.03
COL4A1-201ENST00000375820 DCUN1D2Q6PH85 259 aa15.27■□□□□ 0.03
COL4A1-201ENST00000375820 SNX29Q8TEQ0 813 aa15.27■□□□□ 0.03
COL4A1-201ENST00000375820 CFBP00751 764 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 BIRC2Q13490 618 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 CNBD1Q8NA66 436 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 HIBADHP31937 336 aaKnown RBP15.26■□□□□ 0.03
COL4A1-201ENST00000375820 TTC6Q86TZ1 520 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 CEP120Q8N960 986 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 ABL1P00519 1130 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 PAK1Q13153 545 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 ANKRD42Q8N9B4 389 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 EYA3Q99504 573 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 MRPL44Q9H9J2 332 aaKnown RBP15.26■□□□□ 0.03
COL4A1-201ENST00000375820 RIOK3O14730 519 aaKnown RBP15.26■□□□□ 0.03
COL4A1-201ENST00000375820 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
COL4A1-201ENST00000375820 PLCD1P51178 756 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 CUL4BQ13620 913 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 NSMFQ6X4W1 530 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 MAPKAPK5Q8IW41 473 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 DENND2AQ9ULE3 1009 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 PLCH2O75038 1416 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 MTX1Q13505 466 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
COL4A1-201ENST00000375820 SECISBP2LQ93073 1101 aaKnown RBP15.26■□□□□ 0.03
COL4A1-201ENST00000375820 SLF1Q9BQI6 1058 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 BTG4Q9NY30 223 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 GOLGA6CA6NDK9 693 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 GOLGA6DP0CG33 693 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 UBL4BQ8N7F7 174 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 RNF169Q8NCN4 708 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 GOLGA6AQ9NYA3 693 aa15.26■□□□□ 0.03
COL4A1-201ENST00000375820 VAMP4O75379 141 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 TTC38Q5R3I4 469 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 DDX21Q9NR30 783 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL4A1-201ENST00000375820 STK38LQ9Y2H1 464 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 TYW1BQ6NUM6 668 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 ARFGAP2Q8N6H7 521 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 MCUR1Q96AQ8 359 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 MAP3K5Q99683 1374 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 DEXIO95424 95 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 HHATQ5VTY9 493 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
COL4A1-201ENST00000375820 SARNPP82979 210 aaKnown RBP15.25■□□□□ 0.03
COL4A1-201ENST00000375820 CCDC105Q8IYK2 499 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 NLRC4Q9NPP4 1024 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 GPAA1O43292 621 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 TNNI3KQ59H18 835 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL4A1-201ENST00000375820 EYA1Q99502 592 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 ARHGEF10LQ9HCE6 1279 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL4A1-201ENST00000375820 FPGT-TNNI3KV9GXZ4 949 aa15.25■□□□□ 0.03
COL4A1-201ENST00000375820 ADAT2Q7Z6V5 191 aaKnown RBP15.24■□□□□ 0.03
COL4A1-201ENST00000375820 TGFBRAP1Q8WUH2 860 aa15.24■□□□□ 0.03
COL4A1-201ENST00000375820 NOX5Q96PH1 765 aa15.24■□□□□ 0.03
COL4A1-201ENST00000375820 CBX8Q9HC52 389 aa15.24■□□□□ 0.03
COL4A1-201ENST00000375820 HELLSQ9NRZ9 838 aa15.24■□□□□ 0.03
COL4A1-201ENST00000375820 FAM207AQ9NSI2 230 aaPredicted RBP15.24■□□□□ 0.03
COL4A1-201ENST00000375820 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
COL4A1-201ENST00000375820 NPHP3Q7Z494 1330 aa15.24■□□□□ 0.03
COL4A1-201ENST00000375820 ATP5DP30049 168 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms