RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 PNMA6AP0CW24 399 aaPredicted RBP17.46■□□□□ 0.39
MSH5-203ENST00000375750 GRIN1Q05586 938 aa17.46■□□□□ 0.39
MSH5-203ENST00000375750 GNL2Q13823 731 aaKnown RBP17.46■□□□□ 0.39
MSH5-203ENST00000375750 ZNF827Q17R98 1081 aa17.46■□□□□ 0.39
MSH5-203ENST00000375750 C3orf67Q6ZVT6 689 aa17.46■□□□□ 0.39
MSH5-203ENST00000375750 MPHOSPH8Q99549 860 aa17.46■□□□□ 0.39
MSH5-203ENST00000375750 NHSQ6T4R5 1651 aa17.46■□□□□ 0.38
MSH5-203ENST00000375750 APPP05067 770 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 CCDC152Q4G0S7 254 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 PDILTQ8N807 584 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 ARHGEF1Q92888 912 aaKnown RBP17.45■□□□□ 0.38
MSH5-203ENST00000375750 TRERF1Q96PN7 1200 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 RTCBQ9Y3I0 505 aaKnown RBP17.45■□□□□ 0.38
MSH5-203ENST00000375750 B4E1Z4 1266 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 DHX16O60231 1041 aaKnown RBP17.45■□□□□ 0.38
MSH5-203ENST00000375750 PTPAQ15257 358 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 GRAMD1CQ8IYS0 662 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 LRRC4BQ9NT99 713 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 NARFQ9UHQ1 456 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 PCDHA5Q9Y5H7 936 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 ZPR1O75312 459 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 ADKP55263 362 aaKnown RBP17.45■□□□□ 0.38
MSH5-203ENST00000375750 TRMT44Q8IYL2 757 aaKnown RBP17.45■□□□□ 0.38
MSH5-203ENST00000375750 CCDC24Q8N4L8 307 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 WDR24Q96S15 920 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 TUBE1Q9UJT0 475 aa17.45■□□□□ 0.38
MSH5-203ENST00000375750 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
MSH5-203ENST00000375750 METAP2P50579 478 aaKnown RBP eCLIP17.44■□□□□ 0.38
MSH5-203ENST00000375750 MYL5Q02045 173 aa17.44■□□□□ 0.38
MSH5-203ENST00000375750 BMS1Q14692 1282 aaKnown RBP17.44■□□□□ 0.38
MSH5-203ENST00000375750 UBXN4Q92575 508 aa17.44■□□□□ 0.38
MSH5-203ENST00000375750 NOL10Q9BSC4 688 aaKnown RBP17.44■□□□□ 0.38
MSH5-203ENST00000375750 ZCCHC17Q9NP64 241 aaKnown RBP17.44■□□□□ 0.38
MSH5-203ENST00000375750 VWA3AA6NCI4 1184 aa17.44■□□□□ 0.38
MSH5-203ENST00000375750 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
MSH5-203ENST00000375750 CCDC82Q8N4S0 544 aa17.44■□□□□ 0.38
MSH5-203ENST00000375750 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.44■□□□□ 0.38
MSH5-203ENST00000375750 APPBP2Q92624 585 aa17.44■□□□□ 0.38
MSH5-203ENST00000375750 MAP3K14Q99558 947 aa17.44■□□□□ 0.38
MSH5-203ENST00000375750 HPSEQ9Y251 543 aa17.44■□□□□ 0.38
MSH5-203ENST00000375750 IKBKBO14920 756 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 RANBP6O60518 1105 aaKnown RBP17.43■□□□□ 0.38
MSH5-203ENST00000375750 TOP1P11387 765 aaKnown RBP17.43■□□□□ 0.38
MSH5-203ENST00000375750 MCAMP43121 646 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 VSTM4Q8IW00 320 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 FBXL16Q8N461 479 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 MNS1Q8NEH6 495 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 DESI2Q9BSY9 194 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 PARP3Q9Y6F1 533 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 PRR29P0C7W0 189 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 TOGARAM2Q6ZUX3 1019 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 TMEM139Q8IV31 216 aa17.43■□□□□ 0.38
MSH5-203ENST00000375750 CMTR1Q8N1G2 835 aaKnown RBP17.43■□□□□ 0.38
MSH5-203ENST00000375750 FAM196AQ6ZSG2 479 aa17.42■□□□□ 0.38
MSH5-203ENST00000375750 MROH5Q6ZUA9 1318 aa17.42■□□□□ 0.38
MSH5-203ENST00000375750 ATP2B1P20020 1258 aa17.42■□□□□ 0.38
MSH5-203ENST00000375750 GUCY1A2P33402 732 aa17.42■□□□□ 0.38
MSH5-203ENST00000375750 FMR1Q06787 632 aaKnown RBP eCLIP17.42■□□□□ 0.38
MSH5-203ENST00000375750 CNNM3Q8NE01 707 aa17.42■□□□□ 0.38
MSH5-203ENST00000375750 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
MSH5-203ENST00000375750 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
MSH5-203ENST00000375750 A0A0U1RQJ8 604 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 TADA3O75528 432 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 IGHMBP2P38935 993 aaKnown RBP17.41■□□□□ 0.38
MSH5-203ENST00000375750 PHKA1P46020 1223 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 PUM3Q15397 648 aaKnown RBP17.41■□□□□ 0.38
MSH5-203ENST00000375750 SLC9C2Q5TAH2 1124 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 ATRIPQ8WXE1 791 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 IRX2Q9BZI1 471 aaPredicted RBP17.41■□□□□ 0.38
MSH5-203ENST00000375750 PODXL2Q9NZ53 605 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 PPP2R2CQ9Y2T4 447 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 NRDCO43847 1150 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 IDH1O75874 414 aaKnown RBP17.41■□□□□ 0.38
MSH5-203ENST00000375750 SASH3O75995 380 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 TRIM37O94972 964 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 MTF1Q14872 753 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 KARSQ15046 597 aaKnown RBP17.41■□□□□ 0.38
MSH5-203ENST00000375750 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 APOA5Q6Q788 366 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 NFXL1Q6ZNB6 911 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 KRT27Q7Z3Y8 459 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 PIH1D3Q9NQM4 214 aaKnown RBP17.41■□□□□ 0.38
MSH5-203ENST00000375750 KCNH3Q9ULD8 1083 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 ANGEL1Q9UNK9 670 aaKnown RBP17.41■□□□□ 0.38
MSH5-203ENST00000375750 KCNJ14Q9UNX9 436 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 SBF2Q86WG5 1849 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 ZMYM6O95789 1325 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 BCORQ6W2J9 1755 aa17.41■□□□□ 0.38
MSH5-203ENST00000375750 ZRANB2O95218 330 aaKnown RBP eCLIP17.4■□□□□ 0.38
MSH5-203ENST00000375750 FGFR2P21802 821 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 RESP18Q5W5W9 173 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 LPIN2Q92539 896 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 CCDC34Q96HJ3 373 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 FAM217BQ9NTX9 383 aaPredicted RBP17.4■□□□□ 0.38
MSH5-203ENST00000375750 TACC3Q9Y6A5 838 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 SH2B2O14492 632 aaPredicted RBP17.4■□□□□ 0.38
MSH5-203ENST00000375750 GNG11P61952 73 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 KRBA2Q6ZNG9 492 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms