RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 JAKMIP2Q96AA8 810 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 PLEKHG3A1L390 1219 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 PSMA7O14818 248 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 ADALQ6DHV7 355 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 NSUN7Q8NE18 718 aaKnown RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 AFAP1L1Q8TED9 768 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 FRMPD1Q5SYB0 1578 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 GOLGA6L7A0A1B0GV03 622 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 FANCLQ9NW38 375 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 CALM1P0DP23 149 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 CALM2P0DP24 149 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 CALM3P0DP25 149 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 FAM47AQ5JRC9 791 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 RBM28Q9NW13 759 aaKnown RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 AATFQ9NY61 560 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 CPS1P31327 1500 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 REREQ9P2R6 1566 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 PAK1Q13153 545 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 MYSM1Q5VVJ2 828 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 TMTC2Q8N394 836 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 RAB34Q9BZG1 259 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 KCNF1Q9H3M0 494 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 TBC1D7Q9P0N9 293 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 TACC1O75410 805 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 GABPB1Q06547 395 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 RESTQ13127 1097 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 TTC38Q5R3I4 469 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 MICALCLQ6ZW33 695 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 CCDC24Q8N4L8 307 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 VPS36Q86VN1 386 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 GBP2P32456 591 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 FAM76AQ8TAV0 307 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 EIF6P56537 245 aaKnown RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 PI16Q6UXB8 463 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 SMYD4Q8IYR2 804 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 SELENOSQ9BQE4 189 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 NAA15Q9BXJ9 866 aaKnown RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 KRT86O43790 486 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 TUBB4AP04350 444 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 CYP21A2P08686 494 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 ADD1P35611 737 aaKnown RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 TNNI2P48788 182 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 KRT83P78385 493 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 PLS1Q14651 629 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 NOC4LQ9BVI4 516 aaKnown RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 BMP15O95972 392 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 LETM2Q2VYF4 491 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 TMEM87AQ8NBN3 555 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 CUL5Q93034 780 aa7.38□□□□□ -1.23
SMC1A-202ENST00000375340 RRP36Q96EU6 259 aaKnown RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 LUC7L2Q9Y383 392 aaKnown RBP7.38□□□□□ -1.23
SMC1A-202ENST00000375340 C6orf229H3BNL8 230 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 KRT13P13646 458 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 CCDC42Q96M95 316 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 MNAT1P51948 309 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 DTHD1Q6ZMT9 781 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 DHX40Q8IX18 779 aaKnown RBP7.37□□□□□ -1.23
SMC1A-202ENST00000375340 TMEM87BQ96K49 555 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 TSGA10Q9BZW7 698 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 HPDP32754 393 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-202ENST00000375340 ARAP3Q8WWN8 1544 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 MAST3O60307 1309 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 PHKG2P15735 406 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 KIF5AQ12840 1032 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 KIAA1524Q8TCG1 905 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 ZNF274Q96GC6 653 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-202ENST00000375340 GPHNQ9NQX3 736 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-202ENST00000375340 MED23Q9ULK4 1368 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 PLEKHG1Q9ULL1 1385 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 BAG3O95817 575 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 MORC3Q14149 939 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 TTC19Q6DKK2 380 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-202ENST00000375340 SYCP3Q8IZU3 236 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 GJB4Q9NTQ9 266 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 A2ML1A8K2U0 1454 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 FGAP02671 866 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 GSTO1P78417 241 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 IQUBQ8NA54 791 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 UBLCP1Q8WVY7 318 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-202ENST00000375340 MRFAP1L1Q96HT8 127 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 TFCP2L1Q9NZI6 479 aa7.37□□□□□ -1.23
SMC1A-202ENST00000375340 BICDL2A1A5D9 508 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 CTSWP56202 376 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SF3A3Q12874 501 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 UBE4AQ14139 1066 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 RILPL1Q5EBL4 403 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SDR42E1Q8WUS8 393 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PGBD1Q96JS3 809 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 NCOA3Q9Y6Q9 1424 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 KCNJ18B7U540 433 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 SPAG1Q07617 926 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PPARAQ07869 468 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PDE4DQ08499 809 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 NCBP1Q09161 790 aaKnown RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 KCNJ12Q14500 433 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 NAA30Q147X3 362 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-202ENST00000375340 PTPROQ16827 1216 aa7.36□□□□□ -1.23
SMC1A-202ENST00000375340 CCDC144BQ3MJ40 725 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms