RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 COPRSQ9NQ92 184 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 PAK6Q9NQU5 681 aaPredicted RBP17.43■□□□□ 0.38
PTCH1-202ENST00000375271 SZT2Q5T011 3432 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
PTCH1-202ENST00000375271 TBC1D12O60347 775 aa17.42■□□□□ 0.38
PTCH1-202ENST00000375271 HMGCS2P54868 508 aa17.42■□□□□ 0.38
PTCH1-202ENST00000375271 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
PTCH1-202ENST00000375271 ANKLE1Q8NAG6 615 aa17.42■□□□□ 0.38
PTCH1-202ENST00000375271 XAGE2Q96GT9 111 aa17.42■□□□□ 0.38
PTCH1-202ENST00000375271 TMOD4Q9NZQ9 345 aa17.42■□□□□ 0.38
PTCH1-202ENST00000375271 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
PTCH1-202ENST00000375271 STAP2Q9UGK3 403 aa17.42■□□□□ 0.38
PTCH1-202ENST00000375271 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
PTCH1-202ENST00000375271 GPR75-ASB3A0A0A6YYF3 556 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 FAM196BA6NMK8 535 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 USP17L5A8MUK1 530 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 GNAI3P08754 354 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 CT47B1P0C2W7 299 aaPredicted RBP17.41■□□□□ 0.38
PTCH1-202ENST00000375271 MAP3K10Q02779 954 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 PDE3AQ14432 1141 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 TEX11Q8IYF3 940 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
PTCH1-202ENST00000375271 PHIPQ8WWQ0 1821 aa17.4■□□□□ 0.38
PTCH1-202ENST00000375271 ZBTB22O15209 634 aa17.4■□□□□ 0.38
PTCH1-202ENST00000375271 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
PTCH1-202ENST00000375271 TFCP2Q12800 502 aa17.4■□□□□ 0.38
PTCH1-202ENST00000375271 CRISPLD2Q9H0B8 497 aa17.4■□□□□ 0.38
PTCH1-202ENST00000375271 PRO3102Q9H379 93 aa17.4■□□□□ 0.38
PTCH1-202ENST00000375271 HERC5Q9UII4 1024 aaKnown RBP17.4■□□□□ 0.38
PTCH1-202ENST00000375271 RANBP2P49792 3224 aaKnown RBP17.4■□□□□ 0.38
PTCH1-202ENST00000375271 DLL1O00548 723 aa17.39■□□□□ 0.37
PTCH1-202ENST00000375271 BAG3O95817 575 aa17.39■□□□□ 0.37
PTCH1-202ENST00000375271 SLURP2P0DP57 97 aa17.39■□□□□ 0.37
PTCH1-202ENST00000375271 CRACR2BQ8N4Y2 399 aaPredicted RBP17.39■□□□□ 0.37
PTCH1-202ENST00000375271 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
PTCH1-202ENST00000375271 MEIS3Q99687 375 aa17.39■□□□□ 0.37
PTCH1-202ENST00000375271 ASCC2Q9H1I8 757 aaPredicted RBP17.39■□□□□ 0.37
PTCH1-202ENST00000375271 ZMYND8Q9ULU4 1186 aaPredicted RBP17.39■□□□□ 0.37
PTCH1-202ENST00000375271 ATAD5Q96QE3 1844 aa17.39■□□□□ 0.37
PTCH1-202ENST00000375271 RPTORQ8N122 1335 aa17.39■□□□□ 0.37
PTCH1-202ENST00000375271 COL2A1P02458 1487 aaPredicted RBP17.38■□□□□ 0.37
PTCH1-202ENST00000375271 LOC285556D6RIA3 1793 aa17.38■□□□□ 0.37
PTCH1-202ENST00000375271 PLCG2P16885 1265 aa17.38■□□□□ 0.37
PTCH1-202ENST00000375271 CAP2P40123 477 aa17.38■□□□□ 0.37
PTCH1-202ENST00000375271 RHBDL3P58872 404 aa17.38■□□□□ 0.37
PTCH1-202ENST00000375271 DIS3LQ8TF46 1054 aaKnown RBP17.38■□□□□ 0.37
PTCH1-202ENST00000375271 C11orf49Q9H6J7 331 aa17.38■□□□□ 0.37
PTCH1-202ENST00000375271 ASNSP08243 561 aa17.37■□□□□ 0.37
PTCH1-202ENST00000375271 UQCRFS1P1P0C7P4 283 aa17.37■□□□□ 0.37
PTCH1-202ENST00000375271 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.37
PTCH1-202ENST00000375271 SOCS4Q8WXH5 440 aa17.37■□□□□ 0.37
PTCH1-202ENST00000375271 LRCH3Q96II8 777 aa17.37■□□□□ 0.37
PTCH1-202ENST00000375271 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
PTCH1-202ENST00000375271 DHX36Q9H2U1 1008 aaKnown RBP17.37■□□□□ 0.37
PTCH1-202ENST00000375271 HMG20BQ9P0W2 317 aa17.37■□□□□ 0.37
PTCH1-202ENST00000375271 PI4KBQ9UBF8 816 aa17.37■□□□□ 0.37
PTCH1-202ENST00000375271 ZKSCAN1P17029 563 aaPredicted RBP17.36■□□□□ 0.37
PTCH1-202ENST00000375271 CYP2B6P20813 491 aa17.36■□□□□ 0.37
PTCH1-202ENST00000375271 MTMR2Q13614 643 aa17.36■□□□□ 0.37
PTCH1-202ENST00000375271 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
PTCH1-202ENST00000375271 TRMT44Q8IYL2 757 aaKnown RBP17.36■□□□□ 0.37
PTCH1-202ENST00000375271 NSUN4Q96CB9 384 aaKnown RBP17.36■□□□□ 0.37
PTCH1-202ENST00000375271 DOCK3Q8IZD9 2030 aa17.35■□□□□ 0.37
PTCH1-202ENST00000375271 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
PTCH1-202ENST00000375271 TTC39AQ5SRH9 613 aa17.35■□□□□ 0.37
PTCH1-202ENST00000375271 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
PTCH1-202ENST00000375271 TBC1D9Q6ZT07 1266 aa17.35■□□□□ 0.37
PTCH1-202ENST00000375271 GPRC5AQ8NFJ5 357 aa17.35■□□□□ 0.37
PTCH1-202ENST00000375271 GTF3C2Q8WUA4 911 aaPredicted RBP17.35■□□□□ 0.37
PTCH1-202ENST00000375271 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
PTCH1-202ENST00000375271 SOX1O00570 391 aaPredicted RBP17.34■□□□□ 0.37
PTCH1-202ENST00000375271 HLA-DOAP06340 250 aa17.34■□□□□ 0.37
PTCH1-202ENST00000375271 PRKAR2AP13861 404 aaKnown RBP17.34■□□□□ 0.37
PTCH1-202ENST00000375271 SYN1P17600 705 aa17.34■□□□□ 0.37
PTCH1-202ENST00000375271 MAPK4P31152 587 aa17.34■□□□□ 0.37
PTCH1-202ENST00000375271 BMP8BP34820 402 aa17.34■□□□□ 0.37
PTCH1-202ENST00000375271 SH3D19Q5HYK7 790 aa17.34■□□□□ 0.37
PTCH1-202ENST00000375271 PI16Q6UXB8 463 aa17.34■□□□□ 0.37
PTCH1-202ENST00000375271 DEFB123Q8N688 67 aa17.34■□□□□ 0.37
PTCH1-202ENST00000375271 UBE2OQ9C0C9 1292 aaKnown RBP17.34■□□□□ 0.37
PTCH1-202ENST00000375271 AATFQ9NY61 560 aaKnown RBP eCLIP17.34■□□□□ 0.37
PTCH1-202ENST00000375271 DDX60LQ5H9U9 1706 aaKnown RBP17.33■□□□□ 0.37
PTCH1-202ENST00000375271 C19orf81C9J6K1 198 aa17.33■□□□□ 0.36
PTCH1-202ENST00000375271 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.36
PTCH1-202ENST00000375271 GNAI2P04899 355 aa17.33■□□□□ 0.36
PTCH1-202ENST00000375271 BACE1P56817 501 aa17.33■□□□□ 0.36
PTCH1-202ENST00000375271 CCDC158Q5M9N0 1113 aa17.33■□□□□ 0.36
PTCH1-202ENST00000375271 SH3RF3Q8TEJ3 882 aaPredicted RBP17.33■□□□□ 0.36
PTCH1-202ENST00000375271 TRIB2Q92519 343 aa17.33■□□□□ 0.36
PTCH1-202ENST00000375271 PAGR1Q9BTK6 254 aa17.33■□□□□ 0.36
PTCH1-202ENST00000375271 MORF4L1Q9UBU8 362 aa17.33■□□□□ 0.36
PTCH1-202ENST00000375271 USP17L10C9JJH3 530 aa17.32■□□□□ 0.36
PTCH1-202ENST00000375271 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
PTCH1-202ENST00000375271 ARID4AP29374 1257 aaPredicted RBP17.32■□□□□ 0.36
PTCH1-202ENST00000375271 RGS2P41220 211 aa17.32■□□□□ 0.36
PTCH1-202ENST00000375271 HERVK_113P62684 666 aa17.32■□□□□ 0.36
PTCH1-202ENST00000375271 TRIM32Q13049 653 aa17.32■□□□□ 0.36
PTCH1-202ENST00000375271 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
PTCH1-202ENST00000375271 GPR153Q6NV75 609 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms