RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 CFAP57Q96MR6 1250 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 USP31Q70CQ4 1352 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 MBD4O95243 580 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 ATP5JP18859 108 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 PPP2R3AQ06190 1150 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 CFAP58Q5T655 872 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 ZBTB38Q8NAP3 1195 aaPredicted RBP13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 BICD1Q96G01 975 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 PTCH1Q13635 1447 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 DDIT3P35638 169 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 CTSWP56202 376 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 TRMT1LQ7Z2T5 733 aaKnown RBP13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 BRAPQ7Z569 592 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 IFT81Q8WYA0 676 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 NEK11Q8NG66 645 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 MTRF1LQ9UGC7 380 aaKnown RBP13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 MAP3K15Q6ZN16 1313 aa13.81□□□□□ -0.2
NPLOC4-202ENST00000374747 STIM2Q9P246 746 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 NCAPD2Q15021 1401 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 CHMP4BP1P59074 171 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 SETDB1Q15047 1291 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 BAG1Q99933 345 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 LOC102724428A0A0B4J2F2 783 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 UFL1O94874 794 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.21e-6■■■□□ 16.9
NPLOC4-202ENST00000374747 SIK1P57059 783 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 ARID5AQ03989 594 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 GSTA5Q7RTV2 222 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 MYL5Q02045 173 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 TSGA10Q9BZW7 698 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 GGA1Q9UJY5 639 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 CPSF1Q10570 1443 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 PICALMQ13492 652 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 ATL3Q6DD88 541 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 KRBA2Q6ZNG9 492 aa13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-202ENST00000374747 STX17P56962 302 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 IBTKQ9P2D0 1353 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 LACTBP83111 547 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 HEATR3Q7Z4Q2 680 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 MRVI1Q9Y6F6 885 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 RIMBP2O15034 1052 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 IL6STP40189 918 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 B4GALNT4Q76KP1 1039 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 TLDC2A0PJX2 215 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 PTPDC1A2A3K4 754 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 PABPN1LA6NDY0 278 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 SLC27A2O14975 620 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 APOBRQ0VD83 1088 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 WDR66Q8TBY9 1149 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
NPLOC4-202ENST00000374747 AKR1B15C9JRZ8 316 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 AFAP1L1Q8TED9 768 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 DDX23Q9BUQ8 820 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 RPS6KB1P23443 525 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 CALML3P27482 149 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 SMIM23A6NLE4 172 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 CCDC122Q5T0U0 273 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 PPP1R9BQ96SB3 815 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 RBSNQ9H1K0 784 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 TUBB2AQ13885 445 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 CCDC63Q8NA47 563 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 PPFIBP2Q8ND30 876 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 FAM227BQ96M60 508 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 TUBB2BQ9BVA1 445 aa13.78□□□□□ -0.2
NPLOC4-202ENST00000374747 A0A1B0GUA9 196 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 TAF5LO75529 589 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 TTLL12Q14166 644 aaPredicted RBP13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 TTC6Q86TZ1 520 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 JDP2Q8WYK2 163 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 GPAA1O43292 621 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 LRRC45Q96CN5 670 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 COPRSQ9NQ92 184 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 ANAPC4Q9UJX5 808 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 USP32Q8NFA0 1604 aa13.77□□□□□ -0.2
NPLOC4-202ENST00000374747 WDHD1O75717 1129 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 GABPB1Q06547 395 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 CHST3Q7LGC8 479 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 NAP1L3Q99457 506 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 DIP2BQ9P265 1576 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 KRT2P35908 639 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 NAPAP54920 295 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 FAM160A1Q05DH4 1040 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 SPATA5Q8NB90 893 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 TMEM87BQ96K49 555 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 KCNK9Q9NPC2 374 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 SNX14Q9Y5W7 946 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 RPS8P62241 208 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 CALCOCO2Q13137 446 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 NAA25Q14CX7 972 aa13.77□□□□□ -0.21
NPLOC4-202ENST00000374747 FLAD1Q8NFF5 587 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms