RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RGPD1P0DJD0 1748 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 SLIT2O94813 1529 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 FDPSP14324 419 aaKnown RBP14.66□□□□□ -0.06
PRPF4-201ENST00000374198 PDE4BQ07343 736 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 PREPLQ4J6C6 727 aaPredicted RBP14.66□□□□□ -0.06
PRPF4-201ENST00000374198 MYSM1Q5VVJ2 828 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 RASGRP2Q7LDG7 609 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 SGSM3Q96HU1 749 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.66□□□□□ -0.06
PRPF4-201ENST00000374198 AGPSO00116 658 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 GOLIM4O00461 696 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 GCP02774 474 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 USP14P54578 494 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 OTUD7BQ6GQQ9 843 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 STOX1Q6ZVD7 989 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 N4BP2L2Q92802 583 aaPredicted RBP14.65□□□□□ -0.06
PRPF4-201ENST00000374198 CDC5LQ99459 802 aaKnown RBP14.65□□□□□ -0.06
PRPF4-201ENST00000374198 CRACR2AQ9BSW2 395 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
PRPF4-201ENST00000374198 GRIN2DO15399 1336 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 KIF3CO14782 793 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 ZNF18P17022 549 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 CALRP27797 417 aaKnown RBP14.65□□□□□ -0.06
PRPF4-201ENST00000374198 NF2P35240 595 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 ANO1Q5XXA6 986 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 SYNE3Q6ZMZ3 975 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 RABEP2Q9H5N1 569 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 MYO6Q9UM54 1294 aa14.65□□□□□ -0.06
PRPF4-201ENST00000374198 PHRF1Q9P1Y6 1649 aaKnown RBP14.65□□□□□ -0.06
PRPF4-201ENST00000374198 ATRNO75882 1429 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 SASH1O94885 1247 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 CDC27P30260 824 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 AMPHP49418 695 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 NCAPH2Q6IBW4 605 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 BRAPQ7Z569 592 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 AGXT2Q9BYV1 514 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 HPSEQ9Y251 543 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 GCFC2P16383 781 aaKnown RBP14.64□□□□□ -0.07
PRPF4-201ENST00000374198 PDIA3P30101 505 aaKnown RBP14.64□□□□□ -0.07
PRPF4-201ENST00000374198 GNGT1P63211 74 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 NR1I3Q14994 352 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 OTUD6BQ8N6M0 293 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 TEX13AQ9BXU3 409 aaPredicted RBP14.64□□□□□ -0.07
PRPF4-201ENST00000374198 SAMM50Q9Y512 469 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 PLCH1Q4KWH8 1693 aa14.64□□□□□ -0.07
PRPF4-201ENST00000374198 PI4KAP2A4QPH2 592 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 KIAA0754O94854 1291 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 BMP6P22004 513 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 AMPD2Q01433 879 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 PI4KAP1Q8N8J0 262 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 RNF217Q8TC41 542 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 GJD4Q96KN9 370 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-201ENST00000374198 TTF2Q9UNY4 1162 aaKnown RBP14.63□□□□□ -0.07
PRPF4-201ENST00000374198 NFE2L3Q9Y4A8 694 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 MON2Q7Z3U7 1717 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 PIK3C2AO00443 1686 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 EXOSC10Q01780 885 aaKnown RBP14.63□□□□□ -0.07
PRPF4-201ENST00000374198 C11orf91Q3C1V1 193 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-201ENST00000374198 FOXP4Q8IVH2 680 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-201ENST00000374198 TEX11Q8IYF3 940 aa14.63□□□□□ -0.07
PRPF4-201ENST00000374198 ZNF274Q96GC6 653 aaPredicted RBP14.63□□□□□ -0.07
PRPF4-201ENST00000374198 COL14A1Q05707 1796 aaKnown RBP14.63□□□□□ -0.07
PRPF4-201ENST00000374198 ERCC3P19447 782 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 MARCKSP29966 332 aaPredicted RBP14.62□□□□□ -0.07
PRPF4-201ENST00000374198 CCDC129Q6ZRS4 1044 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 METTL16Q86W50 562 aaKnown RBP14.62□□□□□ -0.07
PRPF4-201ENST00000374198 EDC3Q96F86 508 aaKnown RBP14.62□□□□□ -0.07
PRPF4-201ENST00000374198 C8orf76Q96K31 380 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 ODF2LQ9ULJ1 636 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 PCDHA5Q9Y5H7 936 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 NCAPD2Q15021 1401 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 TMCO5BA8MYB1 307 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 MEFVO15553 781 aaPredicted RBP14.62□□□□□ -0.07
PRPF4-201ENST00000374198 NEBLO76041 1014 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 SLC39A14Q15043 492 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 NBPF20Q3BBV1 942 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 WLSQ5T9L3 541 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 JMYQ8N9B5 988 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 GDAP1L1Q96MZ0 367 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 STRN4Q9NRL3 753 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 RBM28Q9NW13 759 aaKnown RBP14.62□□□□□ -0.07
PRPF4-201ENST00000374198 MYO1AQ9UBC5 1043 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 HOOK1Q9UJC3 728 aaKnown RBP14.62□□□□□ -0.07
PRPF4-201ENST00000374198 ABL1P00519 1130 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 PAX7P23759 505 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 MAP2K1Q02750 393 aaPredicted RBP14.62□□□□□ -0.07
PRPF4-201ENST00000374198 RBL2Q08999 1139 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 SHC4Q6S5L8 630 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 PPFIBP1Q86W92 1011 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 SPATS2Q86XZ4 545 aaKnown RBP14.62□□□□□ -0.07
PRPF4-201ENST00000374198 SH3GL2Q99962 352 aa14.62□□□□□ -0.07
PRPF4-201ENST00000374198 TARSL2A2RTX5 802 aaKnown RBP14.61□□□□□ -0.07
PRPF4-201ENST00000374198 GOLGA6BA6NDN3 693 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 EVA1CP58658 441 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 FMR1Q06787 632 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRPF4-201ENST00000374198 G3BP1Q13283 466 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRPF4-201ENST00000374198 VPS72Q15906 364 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 KCNH5Q8NCM2 988 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms