RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 NEK1Q96PY6 1258 aa17.34■□□□□ 0.37
SMPDL3B-201ENST00000373888 EHD4Q9H223 541 aa17.34■□□□□ 0.37
SMPDL3B-201ENST00000373888 GGA3Q9NZ52 723 aa17.34■□□□□ 0.37
SMPDL3B-201ENST00000373888 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
SMPDL3B-201ENST00000373888 TACC3Q9Y6A5 838 aa17.34■□□□□ 0.37
SMPDL3B-201ENST00000373888 GABPAQ06546 454 aa17.33■□□□□ 0.37
SMPDL3B-201ENST00000373888 C16orf86Q6ZW13 317 aa17.33■□□□□ 0.37
SMPDL3B-201ENST00000373888 ZC3H15Q8WU90 426 aaKnown RBP17.33■□□□□ 0.37
SMPDL3B-201ENST00000373888 CNNM2Q9H8M5 875 aa17.33■□□□□ 0.37
SMPDL3B-201ENST00000373888 ZSWIM6Q9HCJ5 1215 aa17.33■□□□□ 0.37
SMPDL3B-201ENST00000373888 PI4KBQ9UBF8 816 aa17.33■□□□□ 0.37
SMPDL3B-201ENST00000373888 PGAP2Q9UHJ9 254 aa17.33■□□□□ 0.37
SMPDL3B-201ENST00000373888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.33■□□□□ 0.37
SMPDL3B-201ENST00000373888 NEDD4P46934 1319 aa17.33■□□□□ 0.36
SMPDL3B-201ENST00000373888 SIPA1L1O43166 1804 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 HMGB1P09429 215 aaKnown RBP17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 CASTP20810 708 aaKnown RBP17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 PDE4BQ07343 736 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 TRDNQ13061 729 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 RASA3Q14644 834 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 PNMA8AQ86V59 439 aaPredicted RBP17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 METTL16Q86W50 562 aaKnown RBP17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 ZSCAN29Q8IWY8 852 aaPredicted RBP17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 IL27Q8NEV9 243 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 NCOA7Q8NI08 942 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 DYNLL2Q96FJ2 89 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 KRT23Q9C075 422 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 TMEM39BQ9GZU3 492 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 SERPINB13Q9UIV8 391 aa17.32■□□□□ 0.36
SMPDL3B-201ENST00000373888 ORC4O43929 436 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 NT5C2P49902 561 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 BLOC1S2Q6QNY1 142 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 UBE2Q2Q8WVN8 375 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 CSRNP1Q96S65 589 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 DEFB129Q9H1M3 183 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 ZNF287Q9HBT7 754 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 INCENPQ9NQS7 918 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 PPP2R3BQ9Y5P8 575 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 COL9A3Q14050 684 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 RUFY3Q7L099 469 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 FOXP4Q8IVH2 680 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 MB21D2Q8IYB1 491 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 STK11IPQ8N1F8 1099 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 TEPSINQ96N21 525 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 SWAP70Q9UH65 585 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 CYP46A1Q9Y6A2 500 aa17.31■□□□□ 0.36
SMPDL3B-201ENST00000373888 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
SMPDL3B-201ENST00000373888 RPS6KB1P23443 525 aa17.3■□□□□ 0.36
SMPDL3B-201ENST00000373888 CDK8P49336 464 aa17.3■□□□□ 0.36
SMPDL3B-201ENST00000373888 SCAF8Q9UPN6 1271 aaKnown RBP17.3■□□□□ 0.36
SMPDL3B-201ENST00000373888 B4E1Z4 1266 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 PRDM1O75626 825 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 NEK4P51957 841 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 CDAN1Q8IWY9 1227 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 SLC44A5Q8NCS7 719 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 ESR2Q92731 530 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 DCPSQ96C86 337 aaKnown RBP17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 DNAJC18Q9H819 358 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 RRAGCQ9HB90 399 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 WDR19Q8NEZ3 1342 aa17.29■□□□□ 0.36
SMPDL3B-201ENST00000373888 TBC1D12O60347 775 aa17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 KDM4AO75164 1064 aa17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 CPA1P15085 419 aa17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 MCM5P33992 734 aa17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 EAPPQ56P03 285 aaPredicted RBP17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 RRP12Q5JTH9 1297 aaKnown RBP17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 CRACR2BQ8N4Y2 399 aaPredicted RBP17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 NKX2-3Q8TAU0 364 aa17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 TTC14Q96N46 770 aa17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 MKNK2Q9HBH9 465 aa17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
SMPDL3B-201ENST00000373888 RASA1P20936 1047 aa17.27■□□□□ 0.36
SMPDL3B-201ENST00000373888 SHMT1P34896 483 aa17.27■□□□□ 0.36
SMPDL3B-201ENST00000373888 ANTXR2P58335 489 aa17.27■□□□□ 0.36
SMPDL3B-201ENST00000373888 MAP3K10Q02779 954 aa17.27■□□□□ 0.36
SMPDL3B-201ENST00000373888 SULF1Q8IWU6 871 aa17.27■□□□□ 0.36
SMPDL3B-201ENST00000373888 ALDH8A1Q9H2A2 487 aaPredicted RBP17.27■□□□□ 0.36
SMPDL3B-201ENST00000373888 ST18O60284 1047 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 TATDN1Q6P1N9 297 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 CYB5R4Q7L1T6 521 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 FBXL16Q8N461 479 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 MTA3Q9BTC8 594 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 TRIM34Q9BYJ4 488 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 NMRK2Q9NPI5 230 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 PDRG1Q9NUG6 133 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 ZSWIM5Q9P217 1185 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 PRC1O43663 620 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 RANBP6O60518 1105 aaKnown RBP17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 SLURP2P0DP57 97 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 KRT26Q7Z3Y9 468 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 ZNF444Q8N0Y2 327 aaPredicted RBP17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
SMPDL3B-201ENST00000373888 PLIN4Q96Q06 1357 aa17.25■□□□□ 0.35
SMPDL3B-201ENST00000373888 NBPF12Q5TAG4 269 aaPredicted RBP17.25■□□□□ 0.35
SMPDL3B-201ENST00000373888 TCEANC2Q96MN5 208 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms