RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 DCP1AQ9NPI6 582 aaPredicted RBP23.32■■□□□ 1.32
SRSF4-201ENST00000373795 CDKL5O76039 1030 aa23.31■■□□□ 1.32
SRSF4-201ENST00000373795 UFL1O94874 794 aa23.31■■□□□ 1.32
SRSF4-201ENST00000373795 SLC4A8Q2Y0W8 1093 aa23.31■■□□□ 1.32
SRSF4-201ENST00000373795 SYNE3Q6ZMZ3 975 aa23.31■■□□□ 1.32
SRSF4-201ENST00000373795 ESR2Q92731 530 aa23.31■■□□□ 1.32
SRSF4-201ENST00000373795 DNAJC25Q9H1X3 360 aa23.31■■□□□ 1.32
SRSF4-201ENST00000373795 CCDC88AQ3V6T2 1871 aa23.31■■□□□ 1.32
SRSF4-201ENST00000373795 GOLGA6L6A8MZA4 724 aa23.3■■□□□ 1.32
SRSF4-201ENST00000373795 APBA3O96018 575 aa23.3■■□□□ 1.32
SRSF4-201ENST00000373795 PTGS1P23219 599 aa23.3■■□□□ 1.32
SRSF4-201ENST00000373795 CPLX2Q6PUV4 134 aaKnown RBP23.3■■□□□ 1.32
SRSF4-201ENST00000373795 UBAC1Q9BSL1 405 aa23.3■■□□□ 1.32
SRSF4-201ENST00000373795 DIXDC1Q155Q3 683 aa23.3■■□□□ 1.32
SRSF4-201ENST00000373795 SLC26A6Q9BXS9 759 aa23.3■■□□□ 1.32
SRSF4-201ENST00000373795 CRNKL1Q9BZJ0 848 aaKnown RBP23.3■■□□□ 1.32
SRSF4-201ENST00000373795 LDHBP07195 334 aaKnown RBP23.29■■□□□ 1.32
SRSF4-201ENST00000373795 CYP2D6P10635 497 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 ZNF804AQ7Z570 1209 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 COL23A1Q86Y22 540 aaPredicted RBP23.29■■□□□ 1.32
SRSF4-201ENST00000373795 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 CLIC4Q9Y696 253 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 TNKSO95271 1327 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 TPM3P06753 285 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 ZNF165P49910 485 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 KIF23Q02241 960 aaPredicted RBP23.29■■□□□ 1.32
SRSF4-201ENST00000373795 SEC23AQ15436 765 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 SPTY2D1Q68D10 685 aaPredicted RBP23.29■■□□□ 1.32
SRSF4-201ENST00000373795 WDR66Q8TBY9 1149 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 POLLQ9UGP5 575 aa23.29■■□□□ 1.32
SRSF4-201ENST00000373795 GUCY1A2P33402 732 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 KRT40Q6A162 431 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 PRIMPOLQ96LW4 560 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 BBOX1O75936 387 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 ATL3Q6DD88 541 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 ZNF654Q8IZM8 581 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 TSC1Q92574 1164 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 CD209Q9NNX6 404 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 GGA1Q9UJY5 639 aa23.28■■□□□ 1.32
SRSF4-201ENST00000373795 TMTC2Q8N394 836 aa23.27■■□□□ 1.32
SRSF4-201ENST00000373795 ENAHQ8N8S7 591 aaPredicted RBP23.27■■□□□ 1.32
SRSF4-201ENST00000373795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.27■■□□□ 1.32
SRSF4-201ENST00000373795 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
SRSF4-201ENST00000373795 ME1P48163 572 aa23.27■■□□□ 1.32
SRSF4-201ENST00000373795 SSRP1Q08945 709 aaKnown RBP23.27■■□□□ 1.32
SRSF4-201ENST00000373795 RTN1Q16799 776 aa23.27■■□□□ 1.32
SRSF4-201ENST00000373795 MYSM1Q5VVJ2 828 aa23.27■■□□□ 1.32
SRSF4-201ENST00000373795 CCAR1Q8IX12 1150 aaKnown RBP23.27■■□□□ 1.32
SRSF4-201ENST00000373795 ZSCAN10Q96SZ4 725 aaPredicted RBP23.27■■□□□ 1.32
SRSF4-201ENST00000373795 TRIM5Q9C035 493 aa23.27■■□□□ 1.32
SRSF4-201ENST00000373795 ATP8A2Q9NTI2 1148 aa23.27■■□□□ 1.32
SRSF4-201ENST00000373795 FANCBQ8NB91 859 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 GOLPH3LQ9H4A5 285 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 RTEL1Q9NZ71 1219 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 NRBP1Q9UHY1 535 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 FMNL1O95466 1100 aaPredicted RBP23.26■■□□□ 1.31
SRSF4-201ENST00000373795 FGRP09769 529 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 IFNAR1P17181 557 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 ZNF772Q68DY9 489 aaPredicted RBP23.26■■□□□ 1.31
SRSF4-201ENST00000373795 C15orf52Q6ZUT6 534 aaKnown RBP23.26■■□□□ 1.31
SRSF4-201ENST00000373795 CCDC186Q7Z3E2 898 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 DRC7Q8IY82 874 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 TBC1D16Q8TBP0 767 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 AKT1S1Q96B36 256 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 MTA3Q9BTC8 594 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 MCM9Q9NXL9 1143 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 PCDHA7Q9UN72 937 aa23.26■■□□□ 1.31
SRSF4-201ENST00000373795 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
SRSF4-201ENST00000373795 PLSCR1O15162 318 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 NMT2O60551 498 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 ZNF75DP51815 510 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 FAM47AQ5JRC9 791 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 PLA2G4DQ86XP0 818 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 SH3RF3Q8TEJ3 882 aaPredicted RBP23.25■■□□□ 1.31
SRSF4-201ENST00000373795 DUOX1Q9NRD9 1551 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 ECM29Q5VYK3 1845 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 BRAPQ7Z569 592 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 LINC00301Q8NCQ3 95 aa23.25■■□□□ 1.31
SRSF4-201ENST00000373795 LRMPQ12912 555 aa23.24■■□□□ 1.31
SRSF4-201ENST00000373795 OLFM4Q6UX06 510 aa23.24■■□□□ 1.31
SRSF4-201ENST00000373795 NBPF11Q86T75 865 aa23.24■■□□□ 1.31
SRSF4-201ENST00000373795 CRAMP1Q96RY5 1269 aa23.24■■□□□ 1.31
SRSF4-201ENST00000373795 MAP7D2Q96T17 732 aa23.24■■□□□ 1.31
SRSF4-201ENST00000373795 C6orf229H3BNL8 230 aa23.23■■□□□ 1.31
SRSF4-201ENST00000373795 ZBTB22O15209 634 aa23.23■■□□□ 1.31
SRSF4-201ENST00000373795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.23■■□□□ 1.317e-16■■□□□ 12.1
SRSF4-201ENST00000373795 CRACR2BQ8N4Y2 399 aaPredicted RBP23.23■■□□□ 1.31
SRSF4-201ENST00000373795 SNW1Q13573 536 aaKnown RBP23.22■■□□□ 1.31
SRSF4-201ENST00000373795 STK38Q15208 465 aa23.22■■□□□ 1.31
SRSF4-201ENST00000373795 IFIT1BQ5T764 474 aaKnown RBP23.22■■□□□ 1.31
SRSF4-201ENST00000373795 C11orf57Q6ZUT1 292 aaPredicted RBP23.22■■□□□ 1.31
SRSF4-201ENST00000373795 PODXL2Q9NZ53 605 aa23.22■■□□□ 1.31
SRSF4-201ENST00000373795 NID2Q14112 1375 aa23.22■■□□□ 1.31
SRSF4-201ENST00000373795 IL1R1P14778 569 aa23.22■■□□□ 1.31
SRSF4-201ENST00000373795 IQCA1Q86XH1 822 aa23.22■■□□□ 1.31
SRSF4-201ENST00000373795 NLGN1Q8N2Q7 840 aa23.22■■□□□ 1.31
SRSF4-201ENST00000373795 POLR3EQ9NVU0 708 aa23.22■■□□□ 1.31
SRSF4-201ENST00000373795 MKRN1Q9UHC7 482 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms