RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 ZNF654Q8IZM8 581 aa19.27■□□□□ 0.67
HDAC8-206ENST00000373571 CCDC82Q8N4S0 544 aa19.27■□□□□ 0.67
HDAC8-206ENST00000373571 UBAC1Q9BSL1 405 aa19.27■□□□□ 0.67
HDAC8-206ENST00000373571 OSBPL5Q9H0X9 879 aaPredicted RBP19.27■□□□□ 0.67
HDAC8-206ENST00000373571 DEXIO95424 95 aa19.26■□□□□ 0.67
HDAC8-206ENST00000373571 PNOCQ13519 176 aa19.26■□□□□ 0.67
HDAC8-206ENST00000373571 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
HDAC8-206ENST00000373571 KRI1Q8N9T8 703 aaKnown RBP19.26■□□□□ 0.67
HDAC8-206ENST00000373571 NUP133Q8WUM0 1156 aa19.26■□□□□ 0.67
HDAC8-206ENST00000373571 SMARCC1Q92922 1105 aaPredicted RBP19.26■□□□□ 0.67
HDAC8-206ENST00000373571 SPATA31A5Q5VU36 1347 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 SPATA31A7Q8IWB4 1347 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 USP27XA6NNY8 438 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 IKBKBO14920 756 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 RCAN1P53805 252 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 CLEC4GQ6UXB4 293 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 C3orf67Q6ZVT6 689 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 CRACR2BQ8N4Y2 399 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-206ENST00000373571 FANCBQ8NB91 859 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 KCNH3Q9ULD8 1083 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 CASZ1Q86V15 1759 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 COL1A1P02452 1464 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-206ENST00000373571 CTIFO43310 598 aaKnown RBP19.25■□□□□ 0.67
HDAC8-206ENST00000373571 KCNQ2O43526 872 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 TOB1P50616 345 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-206ENST00000373571 FOXP1Q9H334 677 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-206ENST00000373571 ANAPC4Q9UJX5 808 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 PAXBP1Q9Y5B6 917 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 TAF1P21675 1872 aa19.25■□□□□ 0.67
HDAC8-206ENST00000373571 WTIPA6NIX2 430 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-206ENST00000373571 UBE4AQ14139 1066 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 LONRF3Q496Y0 759 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 KRBA2Q6ZNG9 492 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 TMC6Q7Z403 805 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 METTL16Q86W50 562 aaKnown RBP19.24■□□□□ 0.67
HDAC8-206ENST00000373571 CNNM3Q8NE01 707 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 ESR2Q92731 530 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 TNKSO95271 1327 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 CACNA1SQ13698 1873 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 LMOD1P29536 600 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-206ENST00000373571 SF3B3Q15393 1217 aaKnown RBP19.24■□□□□ 0.67
HDAC8-206ENST00000373571 RILPL1Q5EBL4 403 aa19.24■□□□□ 0.67
HDAC8-206ENST00000373571 RIOK1Q9BRS2 568 aaKnown RBP19.24■□□□□ 0.67
HDAC8-206ENST00000373571 BSDC1Q9NW68 430 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-206ENST00000373571 CAVIN4Q5BKX8 364 aa19.23■□□□□ 0.67
HDAC8-206ENST00000373571 CEP135Q66GS9 1140 aa19.23■□□□□ 0.67
HDAC8-206ENST00000373571 ARID3AQ99856 593 aa19.23■□□□□ 0.67
HDAC8-206ENST00000373571 FANCCQ00597 558 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 SEC23AQ15436 765 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 SPECC1Q5M775 1068 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 BARGINQ6ZT62 677 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 CCDC150Q8NCX0 1101 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 SCN7AQ01118 1682 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 MYH6P13533 1939 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 SMIM22K7EJ46 135 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 NR5A1Q13285 461 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 LINC00116Q8NCU8 138 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 HSD3B7Q9H2F3 369 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 MINPP1Q9UNW1 487 aa19.22■□□□□ 0.67
HDAC8-206ENST00000373571 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 DYNLL1P63167 89 aaKnown RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 MYL5Q02045 173 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 PTPN14Q15678 1187 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 OLFM4Q6UX06 510 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 NYAP1Q6ZVC0 841 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 CCAR2Q8N163 923 aaKnown RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 ZNF592Q92610 1267 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 FBXO2Q9UK22 296 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 BAZ2AQ9UIF9 1905 aaKnown RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 ATP1A3P13637 1013 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 PTPREP23469 700 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 GRIN1Q05586 938 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 ARMCX5Q6P1M9 558 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 FOXP4Q8IVH2 680 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 CCDC112Q8NEF3 446 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 RNF26Q9BY78 433 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 KCND1Q9NSA2 647 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 TRMT1Q9NXH9 659 aaKnown RBP19.21■□□□□ 0.67
HDAC8-206ENST00000373571 PCDHB6Q9Y5E3 794 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 PCDHA5Q9Y5H7 936 aa19.21■□□□□ 0.67
HDAC8-206ENST00000373571 BICDL1Q6ZP65 573 aa19.2■□□□□ 0.66
HDAC8-206ENST00000373571 ELOA2Q8IYF1 753 aaPredicted RBP19.2■□□□□ 0.66
HDAC8-206ENST00000373571 ENAHQ8N8S7 591 aaPredicted RBP19.2■□□□□ 0.66
HDAC8-206ENST00000373571 OXER1Q8TDS5 423 aa19.2■□□□□ 0.66
HDAC8-206ENST00000373571 CELF1Q92879 486 aaKnown RBP19.2■□□□□ 0.66
HDAC8-206ENST00000373571 FAM84BQ96KN1 310 aaPredicted RBP19.2■□□□□ 0.66
HDAC8-206ENST00000373571 ZSCAN10Q96SZ4 725 aaPredicted RBP19.2■□□□□ 0.66
HDAC8-206ENST00000373571 BRIP1Q9BX63 1249 aa19.2■□□□□ 0.66
HDAC8-206ENST00000373571 HOOK1Q9UJC3 728 aaKnown RBP19.2■□□□□ 0.66
HDAC8-206ENST00000373571 MYH2Q9UKX2 1941 aa19.2■□□□□ 0.66
HDAC8-206ENST00000373571 CYP2D7A0A087X1C5 515 aa19.19■□□□□ 0.66
HDAC8-206ENST00000373571 FOXN1O15353 648 aa19.19■□□□□ 0.66
HDAC8-206ENST00000373571 SFPQP23246 707 aaKnown RBP eCLIP19.19■□□□□ 0.66
HDAC8-206ENST00000373571 GTF2E1P29083 439 aaPredicted RBP19.19■□□□□ 0.66
HDAC8-206ENST00000373571 AKAP17AQ02040 695 aaKnown RBP19.19■□□□□ 0.66
HDAC8-206ENST00000373571 PPP2R5BQ15173 497 aa19.19■□□□□ 0.66
HDAC8-206ENST00000373571 ZNF831Q5JPB2 1677 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms