RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 RNF26Q9BY78 433 aaPredicted RBP20.85■□□□□ 0.93
CD40-201ENST00000372276 TOMM22Q9NS69 142 aa20.85■□□□□ 0.93
CD40-201ENST00000372276 RBM28Q9NW13 759 aaKnown RBP20.85■□□□□ 0.93
CD40-201ENST00000372276 TUBE1Q9UJT0 475 aa20.85■□□□□ 0.93
CD40-201ENST00000372276 PYCARDQ9ULZ3 195 aa20.85■□□□□ 0.93
CD40-201ENST00000372276 NRDCO43847 1150 aa20.84■□□□□ 0.93
CD40-201ENST00000372276 AKAP17AQ02040 695 aaKnown RBP20.84■□□□□ 0.93
CD40-201ENST00000372276 CRACR2BQ8N4Y2 399 aaPredicted RBP20.84■□□□□ 0.93
CD40-201ENST00000372276 KRI1Q8N9T8 703 aaKnown RBP20.84■□□□□ 0.93
CD40-201ENST00000372276 ZNF579Q8NAF0 562 aaKnown RBP20.84■□□□□ 0.93
CD40-201ENST00000372276 FANCBQ8NB91 859 aa20.84■□□□□ 0.93
CD40-201ENST00000372276 BCL11BQ9C0K0 894 aaPredicted RBP20.84■□□□□ 0.93
CD40-201ENST00000372276 PRKAB2O43741 272 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 FGRP09769 529 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 ERFEQ4G0M1 354 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 ZNF654Q8IZM8 581 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 AOPEPQ8N6M6 819 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 NLRP3Q96P20 1036 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 FAM13BQ9NYF5 915 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 NARFQ9UHQ1 456 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 MINPP1Q9UNW1 487 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 A0A1B0GUL6 1792 aa20.83■□□□□ 0.93
CD40-201ENST00000372276 SCN7AQ01118 1682 aa20.83■□□□□ 0.92
CD40-201ENST00000372276 BMP15O95972 392 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 RRP12Q5JTH9 1297 aaKnown RBP20.82■□□□□ 0.92
CD40-201ENST00000372276 KANK3Q6NY19 840 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 FBXO33Q7Z6M2 555 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 IQCA1Q86XH1 822 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 LRRC8AQ8IWT6 810 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 KCND1Q9NSA2 647 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 ABCF2Q9UG63 623 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 ECM29Q5VYK3 1845 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 RPS6KA4O75676 772 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
CD40-201ENST00000372276 RIOK1Q9BRS2 568 aaKnown RBP20.82■□□□□ 0.92
CD40-201ENST00000372276 SENP2Q9HC62 589 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 PAXBP1Q9Y5B6 917 aa20.82■□□□□ 0.92
CD40-201ENST00000372276 CBFA2T2O43439 604 aa20.81■□□□□ 0.92
CD40-201ENST00000372276 RXRAP19793 462 aa20.81■□□□□ 0.92
CD40-201ENST00000372276 RPS8P62241 208 aaKnown RBP20.81■□□□□ 0.92
CD40-201ENST00000372276 FAM98CQ17RN3 349 aaKnown RBP20.81■□□□□ 0.92
CD40-201ENST00000372276 GLIPR1L2Q4G1C9 344 aa20.81■□□□□ 0.92
CD40-201ENST00000372276 CATIPQ7Z7H3 387 aa20.81■□□□□ 0.92
CD40-201ENST00000372276 NBPF11Q86T75 865 aa20.81■□□□□ 0.92
CD40-201ENST00000372276 LINC00116Q8NCU8 138 aa20.81■□□□□ 0.92
CD40-201ENST00000372276 AIFM3Q96NN9 605 aa20.81■□□□□ 0.92
CD40-201ENST00000372276 OSBPL5Q9H0X9 879 aaPredicted RBP20.81■□□□□ 0.92
CD40-201ENST00000372276 SNAP23O00161 211 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 MARCKSP29966 332 aaPredicted RBP20.8■□□□□ 0.92
CD40-201ENST00000372276 SEC23AQ15436 765 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 SPTY2D1Q68D10 685 aaPredicted RBP20.8■□□□□ 0.92
CD40-201ENST00000372276 OLFM4Q6UX06 510 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 TPTE2Q6XPS3 522 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 CCDC144CPQ8IYA2 1237 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 DIS3L2Q8IYB7 885 aaKnown RBP20.8■□□□□ 0.92
CD40-201ENST00000372276 MIGA1Q8NAN2 632 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 CCDC150Q8NCX0 1101 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 FAM84BQ96KN1 310 aaPredicted RBP20.8■□□□□ 0.92
CD40-201ENST00000372276 SETDB2Q96T68 719 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 GJB4Q9NTQ9 266 aa20.8■□□□□ 0.92
CD40-201ENST00000372276 KIF2AO00139 706 aaPredicted RBP20.79■□□□□ 0.92
CD40-201ENST00000372276 DDAH1O94760 285 aa20.79■□□□□ 0.92
CD40-201ENST00000372276 TUBB4AP04350 444 aa20.79■□□□□ 0.92
CD40-201ENST00000372276 SHC4Q6S5L8 630 aa20.79■□□□□ 0.92
CD40-201ENST00000372276 ZSCAN10Q96SZ4 725 aaPredicted RBP20.79■□□□□ 0.92
CD40-201ENST00000372276 ATP8A2Q9NTI2 1148 aa20.79■□□□□ 0.92
CD40-201ENST00000372276 DACH1Q9UI36 760 aa20.79■□□□□ 0.92
CD40-201ENST00000372276 KCNH3Q9ULD8 1083 aa20.79■□□□□ 0.92
CD40-201ENST00000372276 MINDY4BA8MYZ0 360 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 PRPF3O43395 683 aaKnown RBP20.78■□□□□ 0.92
CD40-201ENST00000372276 ORC4O43929 436 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 GYG1P46976 350 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 CT47A1Q5JQC4 288 aaPredicted RBP20.78■□□□□ 0.92
CD40-201ENST00000372276 KRBA2Q6ZNG9 492 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 SEPT12Q8IYM1 358 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 NKX2-3Q8TAU0 364 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 CACTINQ8WUQ7 758 aaKnown RBP20.78■□□□□ 0.92
CD40-201ENST00000372276 MYL10Q9BUA6 226 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 CRNKL1Q9BZJ0 848 aaKnown RBP20.78■□□□□ 0.92
CD40-201ENST00000372276 BRMS1Q9HCU9 246 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 NRBP1Q9UHY1 535 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 TACC3Q9Y6A5 838 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 CACNA1SQ13698 1873 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 TNKSO95271 1327 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 ZPR1O75312 459 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 PTPREP23469 700 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 KCNJ6P48051 423 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 DPCR1Q3MIW9 517 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 INCENPQ9NQS7 918 aa20.78■□□□□ 0.92
CD40-201ENST00000372276 KCNQ2O43526 872 aa20.77■□□□□ 0.92
CD40-201ENST00000372276 HIBADHP31937 336 aaKnown RBP20.77■□□□□ 0.92
CD40-201ENST00000372276 CCDC178Q5BJE1 867 aa20.77■□□□□ 0.92
CD40-201ENST00000372276 IFIT1BQ5T764 474 aaKnown RBP20.77■□□□□ 0.92
CD40-201ENST00000372276 TRIML1Q8N9V2 468 aa20.77■□□□□ 0.92
CD40-201ENST00000372276 CNNM3Q8NE01 707 aa20.77■□□□□ 0.92
CD40-201ENST00000372276 COL24A1Q17RW2 1714 aa20.77■□□□□ 0.92
CD40-201ENST00000372276 THSD7AQ9UPZ6 1657 aa20.77■□□□□ 0.91
CD40-201ENST00000372276 MROH7-TTC4A0A0A0MT08 1334 aa20.76■□□□□ 0.91
CD40-201ENST00000372276 BTBD18B2RXH4 712 aa20.76■□□□□ 0.91
CD40-201ENST00000372276 SBK1Q52WX2 424 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms