RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 SMAP1Q8IYB5 467 aaPredicted RBP26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 TRIM7Q9C029 511 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 ATP10BO94823 1461 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 ZMYM4Q5VZL5 1548 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 ATL3Q6DD88 541 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 PCDH11XQ9BZA7 1347 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 PCDH11YQ9BZA8 1340 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 ATP2A2P16615 1042 aaKnown RBP26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 ADKP55263 362 aaKnown RBP26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 NELFBQ8WX92 580 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 TRAPPC8Q9Y2L5 1435 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 ZAP70P43403 619 aa26.74■■□□□ 1.87
RAPGEF1-203ENST00000372195 WDR44Q5JSH3 913 aa26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 IP6K1Q92551 441 aa26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 SECISBP2LQ93073 1101 aaKnown RBP26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 TMEM87BQ96K49 555 aa26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 USTQ9Y2C2 406 aa26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 UTP11Q9Y3A2 253 aaKnown RBP26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 HIBADHP31937 336 aaKnown RBP26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 FAM47AQ5JRC9 791 aa26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 INTS8Q75QN2 995 aaKnown RBP26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 POSTNQ15063 836 aa26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 CUTAO60888 179 aa26.73■■□□□ 1.87
RAPGEF1-203ENST00000372195 MYCLP12524 364 aaPredicted RBP26.72■■□□□ 1.87
RAPGEF1-203ENST00000372195 VPS54Q9P1Q0 977 aa26.72■■□□□ 1.87
RAPGEF1-203ENST00000372195 TMEM63CQ9P1W3 806 aa26.72■■□□□ 1.87
RAPGEF1-203ENST00000372195 NCBP1Q09161 790 aaKnown RBP26.72■■□□□ 1.87
RAPGEF1-203ENST00000372195 TTF2Q9UNY4 1162 aaKnown RBP26.72■■□□□ 1.87
RAPGEF1-203ENST00000372195 TPD52P55327 224 aaPredicted RBP26.72■■□□□ 1.87
RAPGEF1-203ENST00000372195 RBM17Q96I25 401 aaKnown RBP26.72■■□□□ 1.87
RAPGEF1-203ENST00000372195 CHAMP1Q96JM3 812 aa26.72■■□□□ 1.87
RAPGEF1-203ENST00000372195 CALUO43852 315 aaPredicted RBP26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 BTG4Q9NY30 223 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 NKIRAS1Q9NYS0 192 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 ME3Q16798 604 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 APPBP2Q92624 585 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 GOLGA6CA6NDK9 693 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 GOLGA6DP0CG33 693 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 PTPROQ16827 1216 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 KRT40Q6A162 431 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 GOLGA6AQ9NYA3 693 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 NFE2L3Q9Y4A8 694 aa26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 PER1O15534 1290 aaPredicted RBP26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 NAP1L3Q99457 506 aaPredicted RBP26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 PPANQ9NQ55 473 aaKnown RBP26.71■■□□□ 1.87
RAPGEF1-203ENST00000372195 ZNF532Q9HCE3 1301 aa26.7■■□□□ 1.87
RAPGEF1-203ENST00000372195 LLPHQ9BRT6 129 aaKnown RBP26.7■■□□□ 1.87
RAPGEF1-203ENST00000372195 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
RAPGEF1-203ENST00000372195 CEP104O60308 925 aa26.7■■□□□ 1.86
RAPGEF1-203ENST00000372195 PPP2R5DQ14738 602 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 ANAPC4Q9UJX5 808 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 SNX29Q8TEQ0 813 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 GJA3Q9Y6H8 435 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 E7EVH7 732 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 ARFGAP2Q8N6H7 521 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 KIFAP3Q92845 792 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 CEP85LQ5SZL2 805 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 MYRIPQ8NFW9 859 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 NOX5Q96PH1 765 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 SERTAD1Q9UHV2 236 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 TCP10Q12799 353 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 KIFC2Q96AC6 838 aa26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 YTHDC2Q9H6S0 1430 aaKnown RBP26.69■■□□□ 1.86
RAPGEF1-203ENST00000372195 INF2Q27J81 1249 aa26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 NDUFAB1O14561 156 aa26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 TRIM14Q14142 442 aa26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 TYW1BQ6NUM6 668 aa26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 TTC6Q86TZ1 520 aa26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 RSRC1Q96IZ7 334 aaKnown RBP26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 MYO1AQ9UBC5 1043 aa26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 E7EWF7 191 aa26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 TUBB4BP68371 445 aa26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 ZNF526Q8TF50 670 aaPredicted RBP26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 MRPL12P52815 198 aaKnown RBP26.68■■□□□ 1.86
RAPGEF1-203ENST00000372195 LRMPQ12912 555 aa26.67■■□□□ 1.86
RAPGEF1-203ENST00000372195 OAS2P29728 719 aaKnown RBP26.67■■□□□ 1.86
RAPGEF1-203ENST00000372195 MSANTD4Q8NCY6 345 aa26.67■■□□□ 1.86
RAPGEF1-203ENST00000372195 DDX17Q92841 729 aaKnown RBP26.67■■□□□ 1.86
RAPGEF1-203ENST00000372195 ODF2LQ9ULJ1 636 aa26.67■■□□□ 1.86
RAPGEF1-203ENST00000372195 ZNF445P59923 1031 aa26.67■■□□□ 1.86
RAPGEF1-203ENST00000372195 XPO4Q9C0E2 1151 aaKnown RBP26.67■■□□□ 1.86
RAPGEF1-203ENST00000372195 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 TRAPPC3LQ5T215 181 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 MAPKAPK5Q8IW41 473 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 PDE8AO60658 829 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 LACTBP83111 547 aaPredicted RBP26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 SPATA5Q8NB90 893 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 BIN2Q9UBW5 565 aaPredicted RBP26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 VGLL3A8MV65 326 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 GCNT3O95395 438 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 PTH1RQ03431 593 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 PKP1Q13835 747 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 MYCT1Q8N699 235 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 SMC1BQ8NDV3 1235 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 ASXL2Q76L83 1435 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 NR1I2O75469 434 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 KCNA6P17658 529 aa26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.66■■□□□ 1.86
RAPGEF1-203ENST00000372195 GEN1Q17RS7 908 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms