RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 CFAP45Q9UL16 551 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 U2AF2P26368 475 aaKnown RBP eCLIP13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 EPS15P42566 896 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 ZNF165P49910 485 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 MICALL2Q8IY33 904 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 AGBL3Q8NEM8 1001 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 COL1A1P02452 1464 aaPredicted RBP13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 USP17L8P0C7I0 530 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 CPA1P15085 419 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 RPS12P25398 132 aaKnown RBP13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 PRDX5P30044 214 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 OGFOD1Q8N543 542 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 GMLQ99445 158 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 GPBP1L1Q9HC44 474 aaPredicted RBP13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 NMRK2Q9NPI5 230 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 LRP2BPQ9P2M1 347 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 MYO3BQ8WXR4 1341 aa13.3□□□□□ -0.28
TSPAN1-201ENST00000372003 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 POTECB2RU33 542 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 H7C1D1 291 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 GOLIM4O00461 696 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 FKBP1AP62942 108 aaKnown RBP13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 TICAM2Q86XR7 235 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 DPF2Q92785 391 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 CHMP4CQ96CF2 233 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 LARP6Q9BRS8 491 aaKnown RBP13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 LLPHQ9BRT6 129 aaKnown RBP13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
TSPAN1-201ENST00000372003 RBM5P52756 815 aaKnown RBP eCLIP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 TPD52L1Q16890 204 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 TBC1D10BQ4KMP7 808 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 CEP135Q66GS9 1140 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 NECAB1Q8N987 351 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 ZNF397Q8NF99 534 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 HAUS7Q99871 368 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 PIH1D3Q9NQM4 214 aaKnown RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 RAI14Q9P0K7 980 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 HDAC9Q9UKV0 1011 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 SCN9AQ15858 1988 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 GOLGA6L19H0YKK7 550 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 VEGFAP15692 232 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 GSDMDP57764 484 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 RESTQ13127 1097 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 IQCB1Q15051 598 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 STX1AQ16623 288 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 NYAP1Q6ZVC0 841 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 ZNF784Q8NCA9 323 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 CACTINQ8WUQ7 758 aaKnown RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 C16orf45Q96MC5 204 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 PAG1Q9NWQ8 432 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 FAM53CQ9NYF3 392 aa13.28□□□□□ -0.28
TSPAN1-201ENST00000372003 PDS5AQ29RF7 1337 aaKnown RBP13.27□□□□□ -0.28
TSPAN1-201ENST00000372003 SALL1Q9NSC2 1324 aa13.27□□□□□ -0.28
TSPAN1-201ENST00000372003 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.28
TSPAN1-201ENST00000372003 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 ZBTB22O15209 634 aa13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 IDH1O75874 414 aaKnown RBP13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 EGFRP00533 1210 aa13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 EPHX2P34913 555 aa13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 KCNJ6P48051 423 aa13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 TOB2Q14106 344 aaPredicted RBP13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 CAMK4Q16566 473 aa13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 EAPPQ56P03 285 aaPredicted RBP13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 DZIP1Q86YF9 867 aaKnown RBP13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 BICD2Q8TD16 824 aa13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 PCDHAC2Q9Y5I4 1007 aa13.27□□□□□ -0.29
TSPAN1-201ENST00000372003 ARAP2Q8WZ64 1704 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 CHD4Q14839 1912 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 ZNF280AP59817 542 aaPredicted RBP13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 LRMPQ12912 555 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 TTF1Q15361 905 aaPredicted RBP13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 DIXDC1Q155Q3 683 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 NAA16Q6N069 864 aaPredicted RBP13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 KRT222Q8N1A0 295 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 KIF18AQ8NI77 898 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 GTF3C6Q969F1 213 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 PGBD1Q96JS3 809 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 TAF1DQ9H5J8 278 aaPredicted RBP13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 MYOZ2Q9NPC6 264 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms