RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 DDX11Q96FC9 970 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 CAPNS2Q96L46 248 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 FRMPD2Q68DX3 1309 aaPredicted RBP8.27□□□□□ -1.09
USP1-202ENST00000371146 PXDNLA1KZ92 1463 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 TMEM88BA6NKF7 163 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 FLOT1O75955 427 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 CSPG5O95196 566 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 SLC16A2P36021 539 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 ANP32AP39687 249 aaKnown RBP8.27□□□□□ -1.09
USP1-202ENST00000371146 PSEN1P49768 467 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 PDE4BQ07343 736 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 SEPT2Q15019 361 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 PLEKHM2Q8IWE5 1019 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 CPA4Q9UI42 421 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 CCL15-CCL14A0A0B4J2E2 113 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 SPDYE2BA6NHP3 402 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 SPDYE6P0CI01 402 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 CCL15Q16663 113 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 LDHDQ86WU2 507 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 UBA5Q9GZZ9 404 aa8.27□□□□□ -1.09
USP1-202ENST00000371146 NMT2O60551 498 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 PLCG2P16885 1265 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 NEK4P51957 841 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 TAF3Q5VWG9 929 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 FBXO33Q7Z6M2 555 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 NCAPG2Q86XI2 1143 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 KBTBD3Q8NAB2 608 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 C7orf43Q8WVR3 580 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 ZIC5Q96T25 663 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 SERPINB13Q9UIV8 391 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 CYP2C8P10632 490 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 PLCD1P51178 756 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 GUCY1B3Q02153 619 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 ABCB5Q2M3G0 1257 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 ADGRA1Q86SQ6 560 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 SLKQ9H2G2 1235 aaPredicted RBP8.26□□□□□ -1.09
USP1-202ENST00000371146 CIAO1O76071 339 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 MCMDC2Q4G0Z9 681 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 FCHSD1Q86WN1 690 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 IQCA1Q86XH1 822 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 PLA2G12BQ9BX93 195 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 RRAGDQ9NQL2 400 aaPredicted RBP8.26□□□□□ -1.09
USP1-202ENST00000371146 IVNS1ABPQ9Y6Y0 642 aa8.26□□□□□ -1.09
USP1-202ENST00000371146 BAZ2BQ9UIF8 2168 aaKnown RBP8.25□□□□□ -1.09
USP1-202ENST00000371146 CCDC69A6NI79 296 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 PDE4AP27815 886 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 SART3Q15020 963 aaKnown RBP8.25□□□□□ -1.09
USP1-202ENST00000371146 KCTD1Q719H9 257 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 ZNF589Q86UQ0 364 aaPredicted RBP8.25□□□□□ -1.09
USP1-202ENST00000371146 AGBL3Q8NEM8 1001 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 NSUN4Q96CB9 384 aaKnown RBP8.25□□□□□ -1.09
USP1-202ENST00000371146 TCEAL9Q9UHQ7 104 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 C4BP0C0L5 1744 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 M0R2C6 588 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 CDC45O75419 566 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 DDX4Q9NQI0 724 aaKnown RBP8.25□□□□□ -1.09
USP1-202ENST00000371146 VIL1P09327 827 aaKnown RBP8.25□□□□□ -1.09
USP1-202ENST00000371146 KIF23Q02241 960 aaPredicted RBP8.25□□□□□ -1.09
USP1-202ENST00000371146 ICA1Q05084 483 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 MTMR2Q13614 643 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 APOBEC3FQ8IUX4 373 aaKnown RBP8.25□□□□□ -1.09
USP1-202ENST00000371146 APPBP2Q92624 585 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 OPTNQ96CV9 577 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 PCDH10Q9P2E7 1040 aa8.25□□□□□ -1.09
USP1-202ENST00000371146 PATL2C9JE40 543 aaKnown RBP8.24□□□□□ -1.09
USP1-202ENST00000371146 FZD9O00144 591 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 KIF20AO95235 890 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 ATP5JP18859 108 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 CASTP20810 708 aaKnown RBP8.24□□□□□ -1.09
USP1-202ENST00000371146 SLC1A4P43007 532 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 NUCB1Q02818 461 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 SLC20A2Q08357 652 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 TMEM67Q5HYA8 995 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 ANKRD13CQ8N6S4 541 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 ALAS1P13196 640 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 CYP2B6P20813 491 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 UBXN2AP68543 259 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 PI4KBQ9UBF8 816 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 RTL9Q8NET4 1388 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 IRF6O14896 467 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 FGAP02671 866 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 LBX1P52954 281 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 DMTNQ08495 405 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 OTUD7BQ6GQQ9 843 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 IFNL3Q8IZI9 196 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 TRIM44Q96DX7 344 aaPredicted RBP8.24□□□□□ -1.09
USP1-202ENST00000371146 KAT14Q9H8E8 782 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 TRIM17Q9Y577 477 aa8.24□□□□□ -1.09
USP1-202ENST00000371146 KIF3CO14782 793 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 TAL1P17542 331 aaPredicted RBP8.23□□□□□ -1.09
USP1-202ENST00000371146 ECE1P42892 770 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 POLA2Q14181 598 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 USP50Q70EL3 339 aaPredicted RBP8.23□□□□□ -1.09
USP1-202ENST00000371146 RASSF8Q8NHQ8 419 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 RBM8AQ9Y5S9 174 aaKnown RBP8.23□□□□□ -1.09
USP1-202ENST00000371146 MYO3BQ8WXR4 1341 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 CENPFP49454 3210 aa8.23□□□□□ -1.09
USP1-202ENST00000371146 ABCA3Q99758 1704 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms