RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 SNAPC2Q13487 334 aa24.96■■□□□ 1.59
SMNDC1-201ENST00000369592 OTUD7BQ6GQQ9 843 aa24.96■■□□□ 1.59
SMNDC1-201ENST00000369592 FAM43AQ8N2R8 423 aa24.96■■□□□ 1.59
SMNDC1-201ENST00000369592 MIGA1Q8NAN2 632 aa24.96■■□□□ 1.59
SMNDC1-201ENST00000369592 ZCCHC17Q9NP64 241 aaKnown RBP24.96■■□□□ 1.59
SMNDC1-201ENST00000369592 PTPRAP18433 802 aa24.95■■□□□ 1.58
SMNDC1-201ENST00000369592 RRP1BQ14684 758 aaKnown RBP24.95■■□□□ 1.58
SMNDC1-201ENST00000369592 MAPKAPK5Q8IW41 473 aa24.95■■□□□ 1.58
SMNDC1-201ENST00000369592 DNAJC2Q99543 621 aaKnown RBP24.95■■□□□ 1.58
SMNDC1-201ENST00000369592 PAG1Q9NWQ8 432 aa24.95■■□□□ 1.58
SMNDC1-201ENST00000369592 PI4KBQ9UBF8 816 aa24.95■■□□□ 1.58
SMNDC1-201ENST00000369592 ATAD5Q96QE3 1844 aa24.95■■□□□ 1.58
SMNDC1-201ENST00000369592 FAM196BA6NMK8 535 aa24.94■■□□□ 1.58
SMNDC1-201ENST00000369592 BTBD19C9JJ37 291 aa24.94■■□□□ 1.58
SMNDC1-201ENST00000369592 CXCL11O14625 94 aa24.94■■□□□ 1.58
SMNDC1-201ENST00000369592 SLC9C2Q5TAH2 1124 aa24.94■■□□□ 1.58
SMNDC1-201ENST00000369592 DNAJC18Q9H819 358 aa24.94■■□□□ 1.58
SMNDC1-201ENST00000369592 HERC5Q9UII4 1024 aaKnown RBP24.94■■□□□ 1.58
SMNDC1-201ENST00000369592 FKTNO75072 461 aa24.93■■□□□ 1.58
SMNDC1-201ENST00000369592 HDAC1Q13547 482 aaPredicted RBP24.93■■□□□ 1.58
SMNDC1-201ENST00000369592 AAMPQ13685 434 aa24.93■■□□□ 1.58
SMNDC1-201ENST00000369592 CTU1Q7Z7A3 348 aaKnown RBP24.93■■□□□ 1.58
SMNDC1-201ENST00000369592 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.93■■□□□ 1.58
SMNDC1-201ENST00000369592 ECHDC1Q9NTX5 307 aa24.93■■□□□ 1.58
SMNDC1-201ENST00000369592 AFG3L2Q9Y4W6 797 aa24.93■■□□□ 1.58
SMNDC1-201ENST00000369592 ZNF532Q9HCE3 1301 aa24.92■■□□□ 1.58
SMNDC1-201ENST00000369592 FOXP4Q8IVH2 680 aaPredicted RBP24.92■■□□□ 1.58
SMNDC1-201ENST00000369592 PALD1Q9ULE6 856 aa24.92■■□□□ 1.58
SMNDC1-201ENST00000369592 ADD2P35612 726 aa24.91■■□□□ 1.58
SMNDC1-201ENST00000369592 BCL11AQ9H165 835 aa24.91■■□□□ 1.58
SMNDC1-201ENST00000369592 ZHX2Q9Y6X8 837 aa24.91■■□□□ 1.58
SMNDC1-201ENST00000369592 CAP2P40123 477 aa24.9■■□□□ 1.58
SMNDC1-201ENST00000369592 ANKRD23Q86SG2 305 aa24.9■■□□□ 1.58
SMNDC1-201ENST00000369592 PICK1Q9NRD5 415 aa24.9■■□□□ 1.58
SMNDC1-201ENST00000369592 SALL3Q9BXA9 1300 aa24.89■■□□□ 1.58
SMNDC1-201ENST00000369592 A0A0G2JLL6 359 aaPredicted RBP24.89■■□□□ 1.58
SMNDC1-201ENST00000369592 MAGEB6P1A0A0J9YX57 407 aa24.89■■□□□ 1.58
SMNDC1-201ENST00000369592 SLFNL1Q499Z3 407 aa24.89■■□□□ 1.58
SMNDC1-201ENST00000369592 GPAT2Q6NUI2 795 aa24.89■■□□□ 1.58
SMNDC1-201ENST00000369592 PRRT2Q7Z6L0 340 aaPredicted RBP24.89■■□□□ 1.58
SMNDC1-201ENST00000369592 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.89■■□□□ 1.58
SMNDC1-201ENST00000369592 NAV1Q8NEY1 1877 aa24.88■■□□□ 1.57
SMNDC1-201ENST00000369592 CHGBP05060 677 aa24.88■■□□□ 1.57
SMNDC1-201ENST00000369592 JAG1P78504 1218 aa24.88■■□□□ 1.57
SMNDC1-201ENST00000369592 CAP1Q01518 475 aa24.88■■□□□ 1.57
SMNDC1-201ENST00000369592 UBE3CQ15386 1083 aa24.88■■□□□ 1.57
SMNDC1-201ENST00000369592 TAF1CQ15572 869 aaPredicted RBP24.88■■□□□ 1.57
SMNDC1-201ENST00000369592 SAP30BPQ9UHR5 308 aaKnown RBP24.88■■□□□ 1.57
SMNDC1-201ENST00000369592 ADGRA2Q96PE1 1338 aa24.87■■□□□ 1.57
SMNDC1-201ENST00000369592 OTUD7AQ8TE49 926 aaPredicted RBP24.87■■□□□ 1.57
SMNDC1-201ENST00000369592 EHD4Q9H223 541 aa24.87■■□□□ 1.57
SMNDC1-201ENST00000369592 ZFYVE28Q9HCC9 887 aa24.87■■□□□ 1.57
SMNDC1-201ENST00000369592 TLR2O60603 784 aa24.86■■□□□ 1.57
SMNDC1-201ENST00000369592 PKN2Q16513 984 aaKnown RBP24.86■■□□□ 1.57
SMNDC1-201ENST00000369592 CCDC84Q86UT8 332 aaPredicted RBP24.86■■□□□ 1.57
SMNDC1-201ENST00000369592 LCORLQ8N3X6 602 aa24.86■■□□□ 1.57
SMNDC1-201ENST00000369592 PI4K2BQ8TCG2 481 aa24.86■■□□□ 1.57
SMNDC1-201ENST00000369592 TTC41PQ6P2S7 1318 aa24.86■■□□□ 1.57
SMNDC1-201ENST00000369592 USP5P45974 858 aa24.85■■□□□ 1.57
SMNDC1-201ENST00000369592 TSHZ3Q63HK5 1081 aa24.85■■□□□ 1.57
SMNDC1-201ENST00000369592 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.85■■□□□ 1.57
SMNDC1-201ENST00000369592 LOC285556D6RIA3 1793 aa24.85■■□□□ 1.57
SMNDC1-201ENST00000369592 SP3Q02447 781 aa24.84■■□□□ 1.57
SMNDC1-201ENST00000369592 TATDN1Q6P1N9 297 aa24.84■■□□□ 1.57
SMNDC1-201ENST00000369592 KBTBD3Q8NAB2 608 aa24.84■■□□□ 1.57
SMNDC1-201ENST00000369592 GCC1Q96CN9 775 aa24.84■■□□□ 1.57
SMNDC1-201ENST00000369592 TBC1D2Q9BYX2 928 aa24.84■■□□□ 1.57
SMNDC1-201ENST00000369592 CRNKL1Q9BZJ0 848 aaKnown RBP24.84■■□□□ 1.57
SMNDC1-201ENST00000369592 GINM1Q9NU53 330 aa24.84■■□□□ 1.57
SMNDC1-201ENST00000369592 HTTP42858 3142 aa24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 PDHXO00330 501 aa24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 HLA-DOAP06340 250 aa24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 PLCD1P51178 756 aa24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 GABPAQ06546 454 aa24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 C17orf99Q6UX52 265 aa24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 EXOC6Q8TAG9 804 aa24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 GPATCH3Q96I76 525 aa24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 DCP1AQ9NPI6 582 aaPredicted RBP24.83■■□□□ 1.57
SMNDC1-201ENST00000369592 BAZ2AQ9UIF9 1905 aaKnown RBP24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 SHROOM1Q2M3G4 852 aaPredicted RBP24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 FASTKD5Q7L8L6 764 aaKnown RBP24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 SMC5Q8IY18 1101 aa24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 ERO1AQ96HE7 468 aa24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 WDR18Q9BV38 432 aa24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 ARMT1Q9H993 441 aa24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 SERPINB13Q9UIV8 391 aa24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 SLC45A1Q9Y2W3 748 aa24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 SUPT16HQ9Y5B9 1047 aaKnown RBP24.82■■□□□ 1.56
SMNDC1-201ENST00000369592 USP17L5A8MUK1 530 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 MBD4O95243 580 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 ASNSP08243 561 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 SH3D19Q5HYK7 790 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 OTOP1Q7RTM1 612 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 TTC6Q86TZ1 520 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 ZNF280CQ8ND82 737 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 CD99L2Q8TCZ2 262 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 SDR42E1Q8WUS8 393 aa24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 PUS7LQ9H0K6 701 aaKnown RBP24.81■■□□□ 1.56
SMNDC1-201ENST00000369592 TRIM75PA6NK02 468 aa24.8■■□□□ 1.56
SMNDC1-201ENST00000369592 PRKAB2O43741 272 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms