RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PTPRAP18433 802 aa23.02■■□□□ 1.28
CKS1B-203ENST00000368439 RRP1BQ14684 758 aaKnown RBP23.02■■□□□ 1.28
CKS1B-203ENST00000368439 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
CKS1B-203ENST00000368439 CTU1Q7Z7A3 348 aaKnown RBP23.02■■□□□ 1.28
CKS1B-203ENST00000368439 METTL16Q86W50 562 aaKnown RBP23.02■■□□□ 1.28
CKS1B-203ENST00000368439 DHX36Q9H2U1 1008 aaKnown RBP23.02■■□□□ 1.28
CKS1B-203ENST00000368439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.02■■□□□ 1.28
CKS1B-203ENST00000368439 CERS3Q8IU89 383 aa23.01■■□□□ 1.27
CKS1B-203ENST00000368439 DNAJC18Q9H819 358 aa23.01■■□□□ 1.27
CKS1B-203ENST00000368439 PI4KBQ9UBF8 816 aa23.01■■□□□ 1.27
CKS1B-203ENST00000368439 HERC5Q9UII4 1024 aaKnown RBP23.01■■□□□ 1.27
CKS1B-203ENST00000368439 ZCCHC17Q9NP64 241 aaKnown RBP23■■□□□ 1.27
CKS1B-203ENST00000368439 FRMD4AQ9P2Q2 1039 aaPredicted RBP23■■□□□ 1.27
CKS1B-203ENST00000368439 PALD1Q9ULE6 856 aa23■■□□□ 1.27
CKS1B-203ENST00000368439 AFG3L2Q9Y4W6 797 aa23■■□□□ 1.27
CKS1B-203ENST00000368439 ZNF532Q9HCE3 1301 aa23■■□□□ 1.27
CKS1B-203ENST00000368439 CXCL11O14625 94 aa22.99■■□□□ 1.27
CKS1B-203ENST00000368439 TAF1CQ15572 869 aaPredicted RBP22.99■■□□□ 1.27
CKS1B-203ENST00000368439 PICK1Q9NRD5 415 aa22.99■■□□□ 1.27
CKS1B-203ENST00000368439 ECHDC1Q9NTX5 307 aa22.99■■□□□ 1.27
CKS1B-203ENST00000368439 ZHX2Q9Y6X8 837 aa22.99■■□□□ 1.27
CKS1B-203ENST00000368439 NAV1Q8NEY1 1877 aa22.98■■□□□ 1.27
CKS1B-203ENST00000368439 SLFNL1Q499Z3 407 aa22.98■■□□□ 1.27
CKS1B-203ENST00000368439 FOXP4Q8IVH2 680 aaPredicted RBP22.98■■□□□ 1.27
CKS1B-203ENST00000368439 SAP30BPQ9UHR5 308 aaKnown RBP22.98■■□□□ 1.27
CKS1B-203ENST00000368439 MAGEB6P1A0A0J9YX57 407 aa22.97■■□□□ 1.27
CKS1B-203ENST00000368439 ADD2P35612 726 aa22.97■■□□□ 1.27
CKS1B-203ENST00000368439 CAP2P40123 477 aa22.97■■□□□ 1.27
CKS1B-203ENST00000368439 CAP1Q01518 475 aa22.97■■□□□ 1.27
CKS1B-203ENST00000368439 ANKRD23Q86SG2 305 aa22.97■■□□□ 1.27
CKS1B-203ENST00000368439 CCDC84Q86UT8 332 aaPredicted RBP22.97■■□□□ 1.27
CKS1B-203ENST00000368439 ZFYVE28Q9HCC9 887 aa22.97■■□□□ 1.27
CKS1B-203ENST00000368439 A0A0G2JLL6 359 aaPredicted RBP22.96■■□□□ 1.27
CKS1B-203ENST00000368439 CHGBP05060 677 aa22.96■■□□□ 1.27
CKS1B-203ENST00000368439 GPAT2Q6NUI2 795 aa22.96■■□□□ 1.27
CKS1B-203ENST00000368439 PRRT2Q7Z6L0 340 aaPredicted RBP22.96■■□□□ 1.27
CKS1B-203ENST00000368439 USP5P45974 858 aa22.95■■□□□ 1.26
CKS1B-203ENST00000368439 JAG1P78504 1218 aa22.95■■□□□ 1.26
CKS1B-203ENST00000368439 HDAC1Q13547 482 aaPredicted RBP22.95■■□□□ 1.26
CKS1B-203ENST00000368439 TSHZ3Q63HK5 1081 aa22.95■■□□□ 1.26
CKS1B-203ENST00000368439 TLR2O60603 784 aa22.94■■□□□ 1.26
CKS1B-203ENST00000368439 SP3Q02447 781 aa22.94■■□□□ 1.26
CKS1B-203ENST00000368439 LCORLQ8N3X6 602 aa22.94■■□□□ 1.26
CKS1B-203ENST00000368439 OTUD7AQ8TE49 926 aaPredicted RBP22.94■■□□□ 1.26
CKS1B-203ENST00000368439 LOC285556D6RIA3 1793 aa22.94■■□□□ 1.26
CKS1B-203ENST00000368439 ADGRA2Q96PE1 1338 aa22.93■■□□□ 1.26
CKS1B-203ENST00000368439 PDHXO00330 501 aa22.93■■□□□ 1.26
CKS1B-203ENST00000368439 HLA-DOAP06340 250 aa22.93■■□□□ 1.26
CKS1B-203ENST00000368439 AAMPQ13685 434 aa22.93■■□□□ 1.26
CKS1B-203ENST00000368439 UBE3CQ15386 1083 aa22.93■■□□□ 1.26
CKS1B-203ENST00000368439 PKN2Q16513 984 aaKnown RBP22.93■■□□□ 1.26
CKS1B-203ENST00000368439 SLC4A8Q2Y0W8 1093 aa22.93■■□□□ 1.26
CKS1B-203ENST00000368439 CD99L2Q8TCZ2 262 aa22.93■■□□□ 1.26
CKS1B-203ENST00000368439 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.93■■□□□ 1.26
CKS1B-203ENST00000368439 ZSWIM8A7E2V4 1837 aa22.93■■□□□ 1.26
CKS1B-203ENST00000368439 SALL3Q9BXA9 1300 aa22.92■■□□□ 1.26
CKS1B-203ENST00000368439 SHROOM1Q2M3G4 852 aaPredicted RBP22.92■■□□□ 1.26
CKS1B-203ENST00000368439 ERO1AQ96HE7 468 aa22.92■■□□□ 1.26
CKS1B-203ENST00000368439 CRNKL1Q9BZJ0 848 aaKnown RBP22.92■■□□□ 1.26
CKS1B-203ENST00000368439 EHD4Q9H223 541 aa22.92■■□□□ 1.26
CKS1B-203ENST00000368439 HTTP42858 3142 aa22.92■■□□□ 1.26
CKS1B-203ENST00000368439 BAZ2AQ9UIF9 1905 aaKnown RBP22.92■■□□□ 1.26
CKS1B-203ENST00000368439 TTC41PQ6P2S7 1318 aa22.91■■□□□ 1.26
CKS1B-203ENST00000368439 TRIM75PA6NK02 468 aa22.91■■□□□ 1.26
CKS1B-203ENST00000368439 CCDC85CA6NKD9 419 aa22.91■■□□□ 1.26
CKS1B-203ENST00000368439 TATDN1Q6P1N9 297 aa22.91■■□□□ 1.26
CKS1B-203ENST00000368439 FASTKD5Q7L8L6 764 aaKnown RBP22.91■■□□□ 1.26
CKS1B-203ENST00000368439 OTOP1Q7RTM1 612 aa22.91■■□□□ 1.26
CKS1B-203ENST00000368439 CRACR2BQ8N4Y2 399 aaPredicted RBP22.91■■□□□ 1.26
CKS1B-203ENST00000368439 PI4K2BQ8TCG2 481 aa22.91■■□□□ 1.26
CKS1B-203ENST00000368439 GPATCH3Q96I76 525 aa22.91■■□□□ 1.26
CKS1B-203ENST00000368439 ARMT1Q9H993 441 aa22.91■■□□□ 1.26
CKS1B-203ENST00000368439 USP17L5A8MUK1 530 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 PLCD1P51178 756 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 EVX2Q03828 476 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 C17orf99Q6UX52 265 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 TTC6Q86TZ1 520 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 EXOC6Q8TAG9 804 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 SDR42E1Q8WUS8 393 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 GCC1Q96CN9 775 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 TBC1D2Q9BYX2 928 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 DCP1AQ9NPI6 582 aaPredicted RBP22.9■■□□□ 1.26
CKS1B-203ENST00000368439 SERPINB13Q9UIV8 391 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 HPS5Q9UPZ3 1129 aa22.9■■□□□ 1.26
CKS1B-203ENST00000368439 PRKAB2O43741 272 aa22.89■■□□□ 1.25
CKS1B-203ENST00000368439 MBD4O95243 580 aa22.89■■□□□ 1.25
CKS1B-203ENST00000368439 SPP2Q13103 211 aa22.89■■□□□ 1.25
CKS1B-203ENST00000368439 FBXO46Q6PJ61 603 aaPredicted RBP22.89■■□□□ 1.25
CKS1B-203ENST00000368439 KBTBD3Q8NAB2 608 aa22.89■■□□□ 1.25
CKS1B-203ENST00000368439 ZNF280CQ8ND82 737 aa22.89■■□□□ 1.25
CKS1B-203ENST00000368439 SLC45A1Q9Y2W3 748 aa22.89■■□□□ 1.25
CKS1B-203ENST00000368439 TRIM17Q9Y577 477 aa22.89■■□□□ 1.25
CKS1B-203ENST00000368439 SUPT16HQ9Y5B9 1047 aaKnown RBP22.89■■□□□ 1.25
CKS1B-203ENST00000368439 GDF11O95390 407 aa22.88■■□□□ 1.25
CKS1B-203ENST00000368439 ASNSP08243 561 aa22.88■■□□□ 1.25
CKS1B-203ENST00000368439 GABPAQ06546 454 aa22.88■■□□□ 1.25
CKS1B-203ENST00000368439 ZSCAN25Q6NSZ9 544 aa22.88■■□□□ 1.25
CKS1B-203ENST00000368439 GADL1Q6ZQY3 521 aa22.88■■□□□ 1.25
CKS1B-203ENST00000368439 WDR18Q9BV38 432 aa22.88■■□□□ 1.25
CKS1B-203ENST00000368439 TRIM34Q9BYJ4 488 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms