RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 OFD1O75665 1012 aa20.27■□□□□ 0.84
LMNA-205ENST00000368299 FAM160A1Q05DH4 1040 aa20.27■□□□□ 0.84
LMNA-205ENST00000368299 SF3A1Q15459 793 aaKnown RBP20.27■□□□□ 0.84
LMNA-205ENST00000368299 FANCBQ8NB91 859 aa20.27■□□□□ 0.84
LMNA-205ENST00000368299 GJB4Q9NTQ9 266 aa20.27■□□□□ 0.84
LMNA-205ENST00000368299 KIF28PB7ZC32 967 aa20.27■□□□□ 0.83
LMNA-205ENST00000368299 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.83
LMNA-205ENST00000368299 TMC4Q7Z404 712 aa20.27■□□□□ 0.83
LMNA-205ENST00000368299 AIFM3Q96NN9 605 aa20.27■□□□□ 0.83
LMNA-205ENST00000368299 PCDHA7Q9UN72 937 aa20.27■□□□□ 0.83
LMNA-205ENST00000368299 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
LMNA-205ENST00000368299 POLRMTO00411 1230 aaKnown RBP20.26■□□□□ 0.83
LMNA-205ENST00000368299 ZNF500O60304 480 aaPredicted RBP20.26■□□□□ 0.83
LMNA-205ENST00000368299 CAVIN2O95810 425 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 TPM2P07951 284 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 U2AF2P26368 475 aaKnown RBP eCLIP20.26■□□□□ 0.83
LMNA-205ENST00000368299 GPSM2P81274 684 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 ANO1Q5XXA6 986 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 SASS6Q6UVJ0 657 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 CERS3Q8IU89 383 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 FAM200AQ8TCP9 573 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 CRAMP1Q96RY5 1269 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 CCDC39Q9UFE4 941 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 GGA1Q9UJY5 639 aa20.26■□□□□ 0.83
LMNA-205ENST00000368299 SPTLC2O15270 562 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 KINO60870 393 aaKnown RBP20.25■□□□□ 0.83
LMNA-205ENST00000368299 DEXIO95424 95 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 CKAP2LQ8IYA6 745 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 MRPS27Q92552 414 aaKnown RBP20.25■□□□□ 0.83
LMNA-205ENST00000368299 PODXL2Q9NZ53 605 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.25■□□□□ 0.83
LMNA-205ENST00000368299 CLIC4Q9Y696 253 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 BAZ2AQ9UIF9 1905 aaKnown RBP20.25■□□□□ 0.83
LMNA-205ENST00000368299 CALM1P0DP23 149 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 CALM2P0DP24 149 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 CALM3P0DP25 149 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.25■□□□□ 0.83
LMNA-205ENST00000368299 CRACR2BQ8N4Y2 399 aaPredicted RBP20.25■□□□□ 0.83
LMNA-205ENST00000368299 ENAHQ8N8S7 591 aaPredicted RBP20.25■□□□□ 0.83
LMNA-205ENST00000368299 ENGASEQ8NFI3 743 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 MRVI1Q9Y6F6 885 aa20.25■□□□□ 0.83
LMNA-205ENST00000368299 CYP2D7A0A087X1C5 515 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 UFL1O94874 794 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 BAG3O95817 575 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 LDHCP07864 332 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 PDE4BQ07343 736 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 DDR1Q08345 913 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 SNW1Q13573 536 aaKnown RBP20.24■□□□□ 0.83
LMNA-205ENST00000368299 IFIT1BQ5T764 474 aaKnown RBP20.24■□□□□ 0.83
LMNA-205ENST00000368299 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 FSIP1Q8NA03 581 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 NUP133Q8WUM0 1156 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.24■□□□□ 0.83
LMNA-205ENST00000368299 SAFBQ15424 915 aaKnown RBP eCLIP20.24■□□□□ 0.83
LMNA-205ENST00000368299 NBPF11Q86T75 865 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 PROM2Q8N271 834 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 GOLPH3LQ9H4A5 285 aa20.24■□□□□ 0.83
LMNA-205ENST00000368299 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
LMNA-205ENST00000368299 NOL10Q9BSC4 688 aaKnown RBP20.23■□□□□ 0.83
LMNA-205ENST00000368299 RNF26Q9BY78 433 aaPredicted RBP20.23■□□□□ 0.83
LMNA-205ENST00000368299 RBM28Q9NW13 759 aaKnown RBP20.23■□□□□ 0.83
LMNA-205ENST00000368299 USP25Q9UHP3 1055 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 JAG2Q9Y219 1238 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 ZKSCAN5Q9Y2L8 839 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 PLSCR1O15162 318 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 IL1R1P14778 569 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 SLC39A14Q15043 492 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 JMYQ8N9B5 988 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 CD209Q9NNX6 404 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 LAMB1P07942 1786 aa20.23■□□□□ 0.83
LMNA-205ENST00000368299 DDAH1O94760 285 aa20.22■□□□□ 0.83
LMNA-205ENST00000368299 PPP4CP60510 307 aa20.22■□□□□ 0.83
LMNA-205ENST00000368299 ZNF772Q68DY9 489 aaPredicted RBP20.22■□□□□ 0.83
LMNA-205ENST00000368299 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.22■□□□□ 0.83
LMNA-205ENST00000368299 ECM29Q5VYK3 1845 aa20.22■□□□□ 0.83
LMNA-205ENST00000368299 SMIM22K7EJ46 135 aa20.22■□□□□ 0.83
LMNA-205ENST00000368299 MMP1P03956 469 aa20.22■□□□□ 0.83
LMNA-205ENST00000368299 TERF1P54274 439 aa20.22■□□□□ 0.83
LMNA-205ENST00000368299 NLGN1Q8N2Q7 840 aa20.22■□□□□ 0.83
LMNA-205ENST00000368299 PPP6R2O75170 966 aa20.21■□□□□ 0.83
LMNA-205ENST00000368299 PRDM1O75626 825 aa20.21■□□□□ 0.83
LMNA-205ENST00000368299 PRKCSHP14314 528 aaPredicted RBP20.21■□□□□ 0.83
LMNA-205ENST00000368299 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
LMNA-205ENST00000368299 AMOTL1Q8IY63 956 aa20.21■□□□□ 0.83
LMNA-205ENST00000368299 FMR1NBQ8N0W7 255 aaPredicted RBP20.21■□□□□ 0.83
LMNA-205ENST00000368299 MCM9Q9NXL9 1143 aa20.21■□□□□ 0.83
LMNA-205ENST00000368299 MKRN1Q9UHC7 482 aaKnown RBP20.21■□□□□ 0.83
LMNA-205ENST00000368299 USP5P45974 858 aa20.2■□□□□ 0.82
LMNA-205ENST00000368299 ANO6Q4KMQ2 910 aa20.2■□□□□ 0.82
LMNA-205ENST00000368299 FOXP1Q9H334 677 aaPredicted RBP20.2■□□□□ 0.82
LMNA-205ENST00000368299 RRP9O43818 475 aaKnown RBP20.2■□□□□ 0.82
LMNA-205ENST00000368299 ADCY5O95622 1261 aa20.2■□□□□ 0.82
LMNA-205ENST00000368299 XBP1P17861 261 aa20.2■□□□□ 0.82
LMNA-205ENST00000368299 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
LMNA-205ENST00000368299 MYH2Q9UKX2 1941 aa20.2■□□□□ 0.82
LMNA-205ENST00000368299 DLEC1Q9Y238 1755 aa20.19■□□□□ 0.82
LMNA-205ENST00000368299 CMA1P23946 247 aa20.19■□□□□ 0.82
LMNA-205ENST00000368299 TROAPQ12815 778 aa20.19■□□□□ 0.82
LMNA-205ENST00000368299 SLC51AQ86UW1 340 aa20.19■□□□□ 0.82
LMNA-205ENST00000368299 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms