RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 FOXK2Q01167 660 aa8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 CAP1Q01518 475 aa8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 AAMPQ13685 434 aa8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 TBC1D9BQ66K14 1250 aa8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 STYK1Q6J9G0 422 aa8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 SLC9A9Q8IVB4 645 aa8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 SCG3Q8WXD2 468 aaKnown RBP8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 TSPAN10Q9H1Z9 355 aaPredicted RBP8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 A0A1W2PP64 1363 aa8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 RTL1A6NKG5 1358 aa8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 SHTN1A0MZ66 631 aa8.28□□□□□ -1.08
ECHDC1-202ENST00000368289 PPP1R12BO60237 982 aaPredicted RBP8.28□□□□□ -1.08
ECHDC1-202ENST00000368289 WDR43Q15061 677 aaKnown RBP eCLIP8.28□□□□□ -1.08
ECHDC1-202ENST00000368289 TEAD4Q15561 434 aa8.28□□□□□ -1.08
ECHDC1-202ENST00000368289 DNAJC10Q8IXB1 793 aa8.28□□□□□ -1.08
ECHDC1-202ENST00000368289 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
ECHDC1-202ENST00000368289 VTI1AQ96AJ9 217 aa8.28□□□□□ -1.08
ECHDC1-202ENST00000368289 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
ECHDC1-202ENST00000368289 BCORQ6W2J9 1755 aa8.27□□□□□ -1.08
ECHDC1-202ENST00000368289 SERTM1A2A2V5 107 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 ERVV-2B6SEH9 535 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 WEE1P30291 646 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 PDE6BP35913 854 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 POU4F2Q12837 409 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 CCDC93Q567U6 631 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 Q7L0L9 218 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 IFNL2Q8IZJ0 200 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 TRPM4Q8TD43 1214 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 TRAIPQ9BWF2 469 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 GPRC5DQ9NZD1 345 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 ZBTB1Q9Y2K1 713 aa8.27□□□□□ -1.09
ECHDC1-202ENST00000368289 GPR25O00155 361 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 PRMT3O60678 531 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 CYP19A1P11511 503 aaPredicted RBP8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 PPP2R1AP30153 589 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 NOS2P35228 1153 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 PLA2G5P39877 138 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 ZNF157P51786 506 aaPredicted RBP8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 C4orf17Q53FE4 359 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 USP48Q86UV5 1035 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 IPO9Q96P70 1041 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 SPG7Q9UQ90 795 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 MTMR7Q9Y216 660 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 AKAP11Q9UKA4 1901 aa8.26□□□□□ -1.09
ECHDC1-202ENST00000368289 NCOR1O75376 2440 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 RBBP6Q7Z6E9 1792 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 COL15A1P39059 1388 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 SOGA3Q5TF21 947 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 C1orf216Q8TAB5 229 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 MASTLQ96GX5 879 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 PRIMPOLQ96LW4 560 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 TIMMDC1Q9NPL8 285 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 ADARB2Q9NS39 739 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 CXXC1Q9P0U4 656 aaPredicted RBP8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 HDAC9Q9UKV0 1011 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 ZNF232Q9UNY5 417 aa8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 NOP58Q9Y2X3 529 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-202ENST00000368289 KLRG2A4D1S0 409 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 LCE2BO14633 110 aa8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 RHOQP17081 205 aa8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 TBCELQ5QJ74 424 aa8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 CC2D1BQ5T0F9 858 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 RASAL3Q86YV0 1011 aa8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 COG3Q96JB2 828 aa8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 STXBP5LQ9Y2K9 1186 aa8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 ZNF521Q96K83 1311 aa8.24□□□□□ -1.09
ECHDC1-202ENST00000368289 LAMB4A4D0S4 1761 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 A0A1B0GTH6 734 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 PATL2C9JE40 543 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 LGR5O75473 907 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 BRD1O95696 1058 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 EGFRP00533 1210 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 PHKA2P46019 1235 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 PLA2G4AP47712 749 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 OCLNQ16625 522 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 NOM1Q5C9Z4 860 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 INTS3Q68E01 1043 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 CDC37L1Q7L3B6 337 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 TRMT2AQ8IZ69 625 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 COL26A1Q96A83 441 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 ARMC5Q96C12 935 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 C2orf49Q9BVC5 232 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 GBA2Q9HCG7 927 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 ZDHHC3Q9NYG2 299 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 DYRK1BQ9Y463 629 aa8.23□□□□□ -1.09
ECHDC1-202ENST00000368289 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 EIF5P55010 431 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 ZNF787Q6DD87 383 aa8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 CENPQQ7L2Z9 268 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 OTOP1Q7RTM1 612 aa8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 PSMD1Q99460 953 aa8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 MTMR10Q9NXD2 777 aa8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 ADAMTS8Q9UP79 889 aa8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 USP3Q9Y6I4 520 aa8.22□□□□□ -1.09
ECHDC1-202ENST00000368289 CARNS1A5YM72 827 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms