RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 MED4Q9NPJ6 270 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 FRMD4BQ9Y2L6 1034 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 MAGEA1P43355 309 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 RAPGEF1Q13905 1077 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 HAUS3Q68CZ6 603 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 KDM5CP41229 1560 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 PFKFB2O60825 505 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 GCKRQ14397 625 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 PPP2R5EQ16537 467 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 ZSCAN26Q16670 478 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 MTX1Q13505 466 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 TAOK1Q7L7X3 1001 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 GAS2L3Q86XJ1 694 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 SYCE1Q8N0S2 351 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 MIGA1Q8NAN2 632 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 CCDC110Q8TBZ0 833 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 LRRC59Q96AG4 307 aaKnown RBP9.24□□□□□ -0.93
SHPRH-203ENST00000367505 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
SHPRH-203ENST00000367505 SAR1BQ9Y6B6 198 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 ATP11AP98196 1134 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 CUL4AQ13619 759 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 PARP10Q53GL7 1025 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 TTC6Q86TZ1 520 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 TDRD7Q8NHU6 1098 aaKnown RBP9.24□□□□□ -0.93
SHPRH-203ENST00000367505 XAGE2Q96GT9 111 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 JAK2O60674 1132 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 PPFIA4O75335 1185 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 LDHBP07195 334 aaKnown RBP9.24□□□□□ -0.93
SHPRH-203ENST00000367505 UBL4BQ8N7F7 174 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 OR8K1Q8NGG5 319 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 ATP7AQ04656 1500 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 A0A1W2PQ27 194 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 A0A1W2PQ64 194 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 A0A1W2PQD8 194 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 E7EWF7 191 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 TPTE2Q6XPS3 522 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 KRT25Q7Z3Z0 450 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 TRIM58Q8NG06 486 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 KIFAP3Q92845 792 aa9.24□□□□□ -0.93
SHPRH-203ENST00000367505 NDC80O14777 642 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 PLCB3Q01970 1234 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 KCNK9Q9NPC2 374 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 PLCB1Q9NQ66 1216 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 NR1I2O75469 434 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 ASIC2Q16515 512 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 USP44Q9H0E7 712 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 FLOT1O75955 427 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 VIMP08670 466 aaKnown RBP9.23□□□□□ -0.93
SHPRH-203ENST00000367505 EEF2P13639 858 aaKnown RBP9.23□□□□□ -0.93
SHPRH-203ENST00000367505 LETM2Q2VYF4 491 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 SUCLG2Q96I99 432 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 ZNF215Q9UL58 517 aaPredicted RBP9.23□□□□□ -0.93
SHPRH-203ENST00000367505 SIRT1Q96EB6 747 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 CABS1Q96KC9 395 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 V9GY48 417 aaPredicted RBP9.23□□□□□ -0.93
SHPRH-203ENST00000367505 UTP14CQ5TAP6 766 aaKnown RBP9.23□□□□□ -0.93
SHPRH-203ENST00000367505 STX10O60499 249 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 ATP6V1AP38606 617 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 RABGGTAQ92696 567 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 HAUS4Q9H6D7 363 aa9.23□□□□□ -0.93
SHPRH-203ENST00000367505 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.23□□□□□ -0.93
SHPRH-203ENST00000367505 CLASP1Q7Z460 1538 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 CALUO43852 315 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-203ENST00000367505 CCDC25Q86WR0 208 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 LPIN2Q92539 896 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 TNFAIP3P21580 790 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 HPDP32754 393 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-203ENST00000367505 PIK3AP1Q6ZUJ8 805 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 DAAM2Q86T65 1068 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 SH3TC1Q8TE82 1336 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 PDE8AO60658 829 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 GNA14O95837 355 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 PFKFB1P16118 471 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 ERCC6LQ2NKX8 1250 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 DCAF17Q5H9S7 520 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-203ENST00000367505 LMNTD2Q8IXW0 634 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 DISP1Q96F81 1524 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 B4DLN1 442 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 EIF4A1P60842 406 aaKnown RBP9.22□□□□□ -0.93
SHPRH-203ENST00000367505 SLC4A8Q2Y0W8 1093 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 NELFBQ8WX92 580 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 STMN2Q93045 179 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 PARP2Q9UGN5 583 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 ITGA6P23229 1130 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 DNM2P50570 870 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 APBA1Q02410 837 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 CACNA2D3Q8IZS8 1091 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 SEC62Q99442 399 aaKnown RBP9.22□□□□□ -0.93
SHPRH-203ENST00000367505 MYO1AQ9UBC5 1043 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 FEZ2Q9UHY8 353 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-203ENST00000367505 PPP2R2CQ9Y2T4 447 aa9.22□□□□□ -0.93
SHPRH-203ENST00000367505 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.22□□□□□ -0.93
SHPRH-203ENST00000367505 TMEM110-MUSTN1A8MSY1 372 aa9.21□□□□□ -0.93
SHPRH-203ENST00000367505 SPOPO43791 374 aa9.21□□□□□ -0.93
SHPRH-203ENST00000367505 NONOQ15233 471 aaKnown RBP eCLIP9.21□□□□□ -0.93
SHPRH-203ENST00000367505 RPS6KA1Q15418 735 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms