RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 RPS6KA1Q15418 735 aa13.77□□□□□ -0.2
TPR-201ENST00000367478 CXorf38Q8TB03 319 aa13.77□□□□□ -0.2
TPR-201ENST00000367478 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
TPR-201ENST00000367478 EXOC5O00471 708 aa13.77□□□□□ -0.21
TPR-201ENST00000367478 KRT71Q3SY84 523 aa13.77□□□□□ -0.21
TPR-201ENST00000367478 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
TPR-201ENST00000367478 NBPF5PQ86XG9 351 aaPredicted RBP13.77□□□□□ -0.21
TPR-201ENST00000367478 HELBQ8NG08 1087 aaPredicted RBP13.77□□□□□ -0.21
TPR-201ENST00000367478 RUNDC3BQ96NL0 473 aa13.77□□□□□ -0.21
TPR-201ENST00000367478 KRT12Q99456 494 aa13.77□□□□□ -0.21
TPR-201ENST00000367478 MIS12Q9H081 205 aa13.77□□□□□ -0.21
TPR-201ENST00000367478 KIF14Q15058 1648 aa13.77□□□□□ -0.21
TPR-201ENST00000367478 PEX26Q7Z412 305 aa13.77□□□□□ -0.21
TPR-201ENST00000367478 IFNL2Q8IZJ0 200 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 CARD10Q9BWT7 1032 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 RIC8AQ9NPQ8 531 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 IPO11Q9UI26 975 aaKnown RBP13.76□□□□□ -0.21
TPR-201ENST00000367478 CTNND2Q9UQB3 1225 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 NAIPQ13075 1403 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 PDE1AP54750 535 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 ANKRD20A4Q4UJ75 823 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 ANKRD20A8PQ5CZ79 823 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 TNNI2P48788 182 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 DEUP1Q05D60 604 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 SMC5Q8IY18 1101 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 RIOK1Q9BRS2 568 aaKnown RBP13.76□□□□□ -0.21
TPR-201ENST00000367478 ZBTB24O43167 697 aaPredicted RBP13.76□□□□□ -0.21
TPR-201ENST00000367478 MAP3K7CLP57077 242 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 PPP2R5BQ15173 497 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 CCDC51Q96ER9 411 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 GRM8O00222 908 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 HACE1Q8IYU2 909 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 ARHGAP42A6NI28 874 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 NACA2Q9H009 215 aa13.76□□□□□ -0.21
TPR-201ENST00000367478 TRIM58Q8NG06 486 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 PI4KAP2A4QPH2 592 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 PARP1P09874 1014 aaKnown RBP13.75□□□□□ -0.21
TPR-201ENST00000367478 PI4KAP1Q8N8J0 262 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.75□□□□□ -0.215e-6■■■□□ 14.8
TPR-201ENST00000367478 STX17P56962 302 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 DIXDC1Q155Q3 683 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 PAK1Q13153 545 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 RSAD2Q8WXG1 361 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 IWS1Q96ST2 819 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 GPTP24298 496 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 TRIM6Q9C030 488 aaPredicted RBP13.75□□□□□ -0.21
TPR-201ENST00000367478 SNRKQ9NRH2 765 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.75□□□□□ -0.21
TPR-201ENST00000367478 SLC9C2Q5TAH2 1124 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 EFHD1Q9BUP0 239 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 TPCN1Q9ULQ1 816 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 ZSCAN26Q16670 478 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 PTPN23Q9H3S7 1636 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 APBA1Q02410 837 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 CSGALNACT2Q8N6G5 542 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 SETDB2Q96T68 719 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 DDX41Q9UJV9 622 aaKnown RBP13.75□□□□□ -0.21
TPR-201ENST00000367478 CD2APQ9Y5K6 639 aa13.75□□□□□ -0.21
TPR-201ENST00000367478 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 TRIM37O94972 964 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 PDZD4Q76G19 769 aaPredicted RBP13.74□□□□□ -0.21
TPR-201ENST00000367478 AFAP1Q8N556 730 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 LRGUKQ96M69 825 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 PSDA5PKW4 1024 aaPredicted RBP13.74□□□□□ -0.21
TPR-201ENST00000367478 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
TPR-201ENST00000367478 RNF8O76064 485 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 STK38LQ9Y2H1 464 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 PALM2Q8IXS6 379 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 BBOF1Q8ND07 529 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 NLRP3Q96P20 1036 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 VWA3AA6NCI4 1184 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 CTTNBP2NLQ9P2B4 639 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 EIF3CLB5ME19 914 aaKnown RBP13.74□□□□□ -0.21
TPR-201ENST00000367478 APOEP02649 317 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
TPR-201ENST00000367478 EIF3CQ99613 913 aaKnown RBP13.74□□□□□ -0.21
TPR-201ENST00000367478 SNCBQ16143 134 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 DEXIO95424 95 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 SYF2O95926 243 aaKnown RBP13.73□□□□□ -0.21
TPR-201ENST00000367478 AMFRQ9UKV5 643 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 MX2P20592 715 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 CDR2Q01850 454 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 PDE4DQ08499 809 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 TRIM42Q8IWZ5 723 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 SCINQ9Y6U3 715 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 TRIM68Q6AZZ1 485 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 CUTAO60888 179 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
TPR-201ENST00000367478 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
TPR-201ENST00000367478 RIPOR2Q9Y4F9 1068 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 SAR1BQ9Y6B6 198 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 GSTA1P08263 222 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 GSTA2P09210 222 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 LMNB1P20700 586 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms