RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 LONRF3Q496Y0 759 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 CCDC155Q8N6L0 562 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 FERMT2Q96AC1 680 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 YEATS2Q9ULM3 1422 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 PRR36Q9H6K5 1346 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
RD3-201ENST00000367002 TRAF1Q13077 416 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 CFAP58Q5T655 872 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 ZNF654Q8IZM8 581 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 FANCLQ9NW38 375 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
RD3-201ENST00000367002 ABCA8O94911 1581 aa12.89□□□□□ -0.35
RD3-201ENST00000367002 AATFQ9NY61 560 aaKnown RBP eCLIP12.88□□□□□ -0.35
RD3-201ENST00000367002 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 PDE6AP16499 860 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 TXKP42681 527 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 RBM6P78332 1123 aaKnown RBP12.88□□□□□ -0.35
RD3-201ENST00000367002 TDRD7Q8NHU6 1098 aaKnown RBP12.88□□□□□ -0.35
RD3-201ENST00000367002 KIAA1524Q8TCG1 905 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
RD3-201ENST00000367002 A0A087WWV3 80 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 TLDC2A0PJX2 215 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 ERCC3P19447 782 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 PPP1R2P41236 205 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 RAPGEF1Q13905 1077 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 CCDC91Q7Z6B0 441 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 CACTINQ8WUQ7 758 aaKnown RBP12.88□□□□□ -0.35
RD3-201ENST00000367002 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 MRPL12P52815 198 aaKnown RBP12.88□□□□□ -0.35
RD3-201ENST00000367002 TUBB2AQ13885 445 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 ARFGAP2Q8N6H7 521 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 FAM76AQ8TAV0 307 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 DESI2Q9BSY9 194 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 TUBB2BQ9BVA1 445 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
RD3-201ENST00000367002 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
RD3-201ENST00000367002 WDR78Q5VTH9 848 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
RD3-201ENST00000367002 FTOQ9C0B1 505 aaKnown RBP eCLIP12.87□□□□□ -0.35
RD3-201ENST00000367002 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 PCDHA5Q9Y5H7 936 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 NSUN7Q8NE18 718 aaKnown RBP12.87□□□□□ -0.35
RD3-201ENST00000367002 ADCY9O60503 1353 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 CCDC65Q8IXS2 484 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 IFNL3Q8IZI9 196 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 OTUD6BQ8N6M0 293 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 PI4K2BQ8TCG2 481 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 INCENPQ9NQS7 918 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 BCORL1Q5H9F3 1711 aa12.87□□□□□ -0.35
RD3-201ENST00000367002 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 USP17L21D6R901 530 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 TNNC1P63316 161 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 CNNM4Q6P4Q7 775 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 SCLT1Q96NL6 688 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 FAM13AO94988 1023 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 MAGEA1P43355 309 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 RNASE9P60153 205 aaKnown RBP12.86□□□□□ -0.35
RD3-201ENST00000367002 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 DCAF17Q5H9S7 520 aaPredicted RBP12.86□□□□□ -0.35
RD3-201ENST00000367002 JAKMIP2Q96AA8 810 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 RTEL1Q9NZ71 1219 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 RCOR1Q9UKL0 485 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 PTCH1Q13635 1447 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 A0A1W2PQ27 194 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 A0A1W2PQ64 194 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 A0A1W2PQD8 194 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 CCNT1O60563 726 aaKnown RBP12.86□□□□□ -0.35
RD3-201ENST00000367002 SASH1O94885 1247 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 PRPHP41219 470 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 ZMYM1Q5SVZ6 1142 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 KRBA2Q6ZNG9 492 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 PSMB7Q99436 277 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 GPCPD1Q9NPB8 672 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 MROH5Q6ZUA9 1318 aa12.86□□□□□ -0.35
RD3-201ENST00000367002 AEBP2Q6ZN18 517 aaPredicted RBP12.85□□□□□ -0.35
RD3-201ENST00000367002 BICD1Q96G01 975 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 EIF6P56537 245 aaKnown RBP12.85□□□□□ -0.35
RD3-201ENST00000367002 NELFBQ8WX92 580 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 TSGA10Q9BZW7 698 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 ATP7BP35670 1465 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 RPL13P26373 211 aaKnown RBP12.85□□□□□ -0.35
RD3-201ENST00000367002 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
RD3-201ENST00000367002 TFAP4Q01664 338 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
RD3-201ENST00000367002 GPATCH11Q8N954 259 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 RGS22Q8NE09 1264 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 LRWD1Q9UFC0 647 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 NONOQ15233 471 aaKnown RBP eCLIP12.85□□□□□ -0.35
RD3-201ENST00000367002 FAM47AQ5JRC9 791 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms