RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 LARGE1O95461 756 aa14.44□□□□□ -0.1
CAPN9-203ENST00000366666 TBC1D10BQ4KMP7 808 aaPredicted RBP14.44□□□□□ -0.1
CAPN9-203ENST00000366666 MFSD6Q6ZSS7 791 aa14.44□□□□□ -0.1
CAPN9-203ENST00000366666 DHX32Q7L7V1 743 aaKnown RBP14.44□□□□□ -0.1
CAPN9-203ENST00000366666 SH3BP5LQ7L8J4 393 aa14.44□□□□□ -0.1
CAPN9-203ENST00000366666 CERS3Q8IU89 383 aa14.44□□□□□ -0.1
CAPN9-203ENST00000366666 NCOA7Q8NI08 942 aa14.44□□□□□ -0.1
CAPN9-203ENST00000366666 ZBED3Q96IU2 234 aaPredicted RBP14.44□□□□□ -0.1
CAPN9-203ENST00000366666 ZSWIM5Q9P217 1185 aa14.44□□□□□ -0.1
CAPN9-203ENST00000366666 KDM4AO75164 1064 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 ZNF280AP59817 542 aaPredicted RBP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 Q6ZUG5 572 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 OSBPL5Q9H0X9 879 aaPredicted RBP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 TOMM22Q9NS69 142 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 DDTLA6NHG4 134 aaPredicted RBP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 TCP10L2B9ZVM9 353 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 K7ELQ4 463 aaPredicted RBP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 RPS12P25398 132 aaKnown RBP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 CDAN1Q8IWY9 1227 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 GPC2Q8N158 579 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 ZKSCAN3Q9BRR0 538 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 SENP2Q9HC62 589 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
CAPN9-203ENST00000366666 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 ISY1Q9ULR0 285 aaKnown RBP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
CAPN9-203ENST00000366666 MYH8P13535 1937 aa14.42□□□□□ -0.1
CAPN9-203ENST00000366666 POLR2AP24928 1970 aaKnown RBP14.42□□□□□ -0.1
CAPN9-203ENST00000366666 EPS15P42566 896 aa14.42□□□□□ -0.1
CAPN9-203ENST00000366666 RALYLQ86SE5 291 aaKnown RBP14.42□□□□□ -0.1
CAPN9-203ENST00000366666 DPF2Q92785 391 aa14.42□□□□□ -0.1
CAPN9-203ENST00000366666 IDI2Q9BXS1 227 aa14.42□□□□□ -0.1
CAPN9-203ENST00000366666 TPCN1Q9ULQ1 816 aa14.42□□□□□ -0.1
CAPN9-203ENST00000366666 DDX11L8A8MPP1 907 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 PRC1O43663 620 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 FGRP09769 529 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 MTMR14Q8NCE2 650 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 TRPM4Q8TD43 1214 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 TMX3Q96JJ7 454 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 CNTNAP1P78357 1384 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 ROBO3Q96MS0 1386 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 FAM196BA6NMK8 535 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 XRCC6P12956 609 aaKnown RBP eCLIP14.41□□□□□ -0.1
CAPN9-203ENST00000366666 TRDNQ13061 729 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 FAM47AQ5JRC9 791 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 BRF1Q92994 677 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 VEZTQ9HBM0 779 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 GPRC5DQ9NZD1 345 aa14.41□□□□□ -0.1
CAPN9-203ENST00000366666 TRAK2O60296 914 aa14.4□□□□□ -0.1
CAPN9-203ENST00000366666 HMGB1P09429 215 aaKnown RBP14.4□□□□□ -0.1
CAPN9-203ENST00000366666 MCM5P33992 734 aa14.4□□□□□ -0.1
CAPN9-203ENST00000366666 RANBP6O60518 1105 aaKnown RBP14.4□□□□□ -0.1
CAPN9-203ENST00000366666 NMT2O60551 498 aa14.4□□□□□ -0.1
CAPN9-203ENST00000366666 HIRAP54198 1017 aaPredicted RBP14.4□□□□□ -0.1
CAPN9-203ENST00000366666 APOBRQ0VD83 1088 aa14.4□□□□□ -0.1
CAPN9-203ENST00000366666 ST3GAL1Q11201 340 aa14.4□□□□□ -0.1
CAPN9-203ENST00000366666 ME3Q16798 604 aa14.4□□□□□ -0.1
CAPN9-203ENST00000366666 CIZ1Q9ULV3 898 aaPredicted RBP14.4□□□□□ -0.1
CAPN9-203ENST00000366666 GRIN3BO60391 1043 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 CDK8P49336 464 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 KIF4BQ2VIQ3 1234 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 AGXT2Q9BYV1 514 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
CAPN9-203ENST00000366666 DNAJC18Q9H819 358 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 DDIT3P35638 169 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 MRE11P49959 708 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 GABPAQ06546 454 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 C16orf86Q6ZW13 317 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 RAB11FIP4Q86YS3 637 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 ZSCAN29Q8IWY8 852 aaPredicted RBP14.39□□□□□ -0.11
CAPN9-203ENST00000366666 NECAB1Q8N987 351 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 IGDCC4Q8TDY8 1250 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 KRT23Q9C075 422 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 TMEM39BQ9GZU3 492 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 ALDH8A1Q9H2A2 487 aaPredicted RBP14.39□□□□□ -0.11
CAPN9-203ENST00000366666 CNNM2Q9H8M5 875 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 RRAGDQ9NQL2 400 aaPredicted RBP14.39□□□□□ -0.11
CAPN9-203ENST00000366666 LIMCH1Q9UPQ0 1083 aa14.39□□□□□ -0.11
CAPN9-203ENST00000366666 ORC4O43929 436 aa14.38□□□□□ -0.11
CAPN9-203ENST00000366666 RASA1P20936 1047 aa14.38□□□□□ -0.11
CAPN9-203ENST00000366666 STK3Q13188 491 aa14.38□□□□□ -0.11
CAPN9-203ENST00000366666 SHROOM1Q2M3G4 852 aaPredicted RBP14.38□□□□□ -0.11
CAPN9-203ENST00000366666 PTMSP20962 102 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 FGD1P98174 961 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 PDE4BQ07343 736 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 HSP90AA2PQ14568 343 aaPredicted RBP14.37□□□□□ -0.11
CAPN9-203ENST00000366666 AMOTL1Q8IY63 956 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 ESR2Q92731 530 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 H7C1D1 291 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 SH2B2O14492 632 aaPredicted RBP14.37□□□□□ -0.11
CAPN9-203ENST00000366666 ENTPD3O75355 529 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 TTC6Q86TZ1 520 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 LY9Q9HBG7 655 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 MKNK2Q9HBH9 465 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 SERPINB13Q9UIV8 391 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 HACL1Q9UJ83 578 aa14.37□□□□□ -0.11
CAPN9-203ENST00000366666 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms