RNA–Protein interactions for RNA: ENST00000366661.8

TTC13-201, Transcript of tetratricopeptide repeat domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC13, Length 3,253 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-201ENST00000366661 BEND6Q5SZJ8 279 aaPredicted RBP17.51■□□□□ 0.39
TTC13-201ENST00000366661 TICAM2Q86XR7 235 aa17.51■□□□□ 0.39
TTC13-201ENST00000366661 CDC5LQ99459 802 aaKnown RBP17.51■□□□□ 0.39
TTC13-201ENST00000366661 UBXN6Q9BZV1 441 aa17.51■□□□□ 0.39
TTC13-201ENST00000366661 KIAA1468Q9P260 1216 aa17.51■□□□□ 0.39
TTC13-201ENST00000366661 SOWAHDA6NJG2 315 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 COBLO75128 1261 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 SASH1O94885 1247 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 ZNF827Q17R98 1081 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 BCAS4Q8TDM0 211 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 N4BP2L2Q92802 583 aaPredicted RBP17.5■□□□□ 0.39
TTC13-201ENST00000366661 EAF2Q96CJ1 260 aaPredicted RBP17.5■□□□□ 0.39
TTC13-201ENST00000366661 MRPL44Q9H9J2 332 aaKnown RBP17.5■□□□□ 0.39
TTC13-201ENST00000366661 MAP3K9P80192 1104 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 NCAPH2Q6IBW4 605 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 AFF2P51816 1311 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 PAX7P23759 505 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 NAIF1Q69YI7 327 aaPredicted RBP17.5■□□□□ 0.39
TTC13-201ENST00000366661 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
TTC13-201ENST00000366661 MKRN1Q9UHC7 482 aaKnown RBP17.5■□□□□ 0.39
TTC13-201ENST00000366661 TNS2Q63HR2 1409 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 ATP8B1O43520 1251 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 PPFIA4O75335 1185 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 RPS6KB1P23443 525 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 HLFQ16534 295 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 KLHL10Q6JEL2 608 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 ZNF589Q86UQ0 364 aaPredicted RBP17.49■□□□□ 0.39
TTC13-201ENST00000366661 NEUROD6Q96NK8 337 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 ACBD3Q9H3P7 528 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
TTC13-201ENST00000366661 STARD3NLO95772 234 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 RPSAP08865 295 aaKnown RBP17.49■□□□□ 0.39
TTC13-201ENST00000366661 PEX19P40855 299 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 PNOCQ13519 176 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 E2F5Q15329 346 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 ANKZF1Q9H8Y5 726 aa17.49■□□□□ 0.39
TTC13-201ENST00000366661 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.49■□□□□ 0.39
TTC13-201ENST00000366661 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
TTC13-201ENST00000366661 IGSF22Q8N9C0 903 aa17.48■□□□□ 0.39
TTC13-201ENST00000366661 MARCH10Q8NA82 808 aaPredicted RBP17.48■□□□□ 0.39
TTC13-201ENST00000366661 NOA1Q8NC60 698 aaKnown RBP17.48■□□□□ 0.39
TTC13-201ENST00000366661 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
TTC13-201ENST00000366661 THSD7AQ9UPZ6 1657 aa17.48■□□□□ 0.39
TTC13-201ENST00000366661 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
TTC13-201ENST00000366661 TRPC5Q9UL62 973 aaPredicted RBP17.48■□□□□ 0.39
TTC13-201ENST00000366661 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
TTC13-201ENST00000366661 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
TTC13-201ENST00000366661 ENC1O14682 589 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 MRC1P22897 1456 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 TFCP2Q12800 502 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 MAP9Q49MG5 647 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 RNF217Q8TC41 542 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 ATP1A2P50993 1020 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 SCRN1Q12765 414 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 BRD3Q15059 726 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 RSRC2Q7L4I2 434 aaKnown RBP17.47■□□□□ 0.39
TTC13-201ENST00000366661 GPIHBP1Q8IV16 184 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 ZNF396Q96N95 335 aaPredicted RBP17.47■□□□□ 0.39
TTC13-201ENST00000366661 PSD3Q9NYI0 1048 aa17.47■□□□□ 0.39
TTC13-201ENST00000366661 KIF6Q6ZMV9 814 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 SCLT1Q96NL6 688 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 GLI3P10071 1580 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 KIF5CO60282 957 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 ZNF202O95125 648 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 ABL1P00519 1130 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 KCNV1Q6PIU1 500 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 SRGAP1Q7Z6B7 1085 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 CRACR2AQ9BSW2 395 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 CUTAO60888 179 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 MATR3P43243 847 aaKnown RBP eCLIP17.46■□□□□ 0.393e-6■■■■□ 21.2
TTC13-201ENST00000366661 KAT14Q9H8E8 782 aa17.46■□□□□ 0.39
TTC13-201ENST00000366661 C5P01031 1676 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 PES1O00541 588 aaKnown RBP17.45■□□□□ 0.38
TTC13-201ENST00000366661 NF2P35240 595 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 STX17P56962 302 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 ANKRD1Q15327 319 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 ECHDC1Q9NTX5 307 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 CACNA1FO60840 1977 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 CTAGE15A4D2H0 777 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 EIF4E1BA6NMX2 242 aaKnown RBP17.45■□□□□ 0.38
TTC13-201ENST00000366661 ARHGAP6O43182 974 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 KIAA0754O94854 1291 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 CTAGE8P0CG41 777 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 SATB1Q01826 763 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 SYNE3Q6ZMZ3 975 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 CTAGE6Q86UF2 777 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 CTAGE4Q8IX94 777 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 SLC35F6Q8N357 371 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.45■□□□□ 0.38
TTC13-201ENST00000366661 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 MAP2K7O14733 419 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 EIF5P55010 431 aaKnown RBP17.45■□□□□ 0.38
TTC13-201ENST00000366661 TIMM10P62072 90 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 NEK1Q96PY6 1258 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
TTC13-201ENST00000366661 L1RE1Q9UN81 338 aa17.45■□□□□ 0.38
TTC13-201ENST00000366661 GNGT1P63211 74 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms