RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 TGFB1P01137 390 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 RPL6Q02878 288 aaKnown RBP5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 SNAP47Q5SQN1 464 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 ZMYM1Q5SVZ6 1142 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 FBXL19Q6PCT2 694 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 CCDC84Q86UT8 332 aaPredicted RBP5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 GOLM1Q8NBJ4 401 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 GATAD2BQ8WXI9 593 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 PSMG3-AS1Q96PY0 264 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 WNT10AQ9GZT5 417 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 FBRSQ9HAH7 460 aa5.48□□□□□ -1.53
RNU4-48P-201ENST00000365559 GRK4P32298 578 aa5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 EIF4A3P38919 411 aaKnown RBP5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 ZNF394Q53GI3 561 aa5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 ZNF765Q7L2R6 523 aa5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 FBXO27Q8NI29 283 aa5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 KCNQ5Q9NR82 932 aa5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 METTL5Q9NRN9 209 aaKnown RBP5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 ADAMTS1Q9UHI8 967 aa5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 RNF112Q9ULX5 631 aa5.47□□□□□ -1.53
RNU4-48P-201ENST00000365559 SCAMP3O14828 347 aaKnown RBP5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 LEFTY1O75610 366 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 FAM87AP0C7U9 286 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 ETF1P62495 437 aaKnown RBP5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 SLBPQ14493 270 aaKnown RBP eCLIP5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 NKG7Q16617 165 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 OGFOD3Q6PK18 319 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 FAM196AQ6ZSG2 479 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 CDC37L1Q7L3B6 337 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 ZNF507Q8TCN5 953 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 ZNF296Q8WUU4 475 aaPredicted RBP5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 RNF34Q969K3 372 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 OSBPL1AQ9BXW6 950 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 ATG3Q9NT62 314 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 PCDHGB7Q9Y5F8 929 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 CORINQ9Y5Q5 1042 aa5.46□□□□□ -1.54
RNU4-48P-201ENST00000365559 TLR3O15455 904 aaKnown RBP5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 GREM1O60565 184 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 MED26O95402 600 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 BPNT1O95861 308 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 HOXA10P31260 410 aaPredicted RBP5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 CRKP46108 304 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 C9orf131Q5VYM1 1079 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 ARMCX6Q7L4S7 300 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 USP48Q86UV5 1035 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 METTL16Q86W50 562 aaKnown RBP5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 TOP6BLQ8N6T0 577 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 GIMAP7Q8NHV1 300 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 DUSP23Q9BVJ7 150 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 PIM2Q9P1W9 311 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 POLR3KQ9Y2Y1 108 aaPredicted RBP5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 SUPT16HQ9Y5B9 1047 aaKnown RBP5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 TACC3Q9Y6A5 838 aa5.45□□□□□ -1.54
RNU4-48P-201ENST00000365559 PGRP06401 933 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 SSTR4P31391 388 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 RBM25P49756 843 aaKnown RBP5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 RACK1P63244 317 aaKnown RBP5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 HDLBPQ00341 1268 aaKnown RBP5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 MPP2Q14168 576 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 DUSP27Q5VZP5 1158 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 HID1Q8IV36 788 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 KCT2Q8NC54 265 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 METTL22Q9BUU2 404 aaPredicted RBP5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 UBP1Q9NZI7 540 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 TJP2Q9UDY2 1190 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 LEMD3Q9Y2U8 911 aa5.44□□□□□ -1.54
RNU4-48P-201ENST00000365559 GRIN3BO60391 1043 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 FOSL1P15407 271 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 CD97P48960 835 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 CYP27A1Q02318 531 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 DIEXFQ68CQ4 756 aaKnown RBP5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 REC114Q7Z4M0 266 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 ACSF2Q96CM8 615 aaPredicted RBP5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 EAF1Q96JC9 268 aaPredicted RBP5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 DPH2Q9BQC3 489 aaPredicted RBP5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 LRRC3Q9BY71 257 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 FOXQ1Q9C009 403 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 LRRC4CQ9HCJ2 640 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 PRDM10Q9NQV6 1147 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 DDX41Q9UJV9 622 aaKnown RBP5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 U3KQE9 123 aa5.43□□□□□ -1.54
RNU4-48P-201ENST00000365559 SCO2A0A1W2PP80 73 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 RBAK-RBAKDNI3L0D1 243 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 COBLO75128 1261 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 LRIG2O94898 1065 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 SLITRK5O94991 958 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 PLCG1P19174 1290 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 CAP2P40123 477 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 PDE4BQ07343 736 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 CPSF6Q16630 551 aaKnown RBP eCLIP5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 CWF19L2Q2TBE0 894 aaKnown RBP5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 CYP27C1Q4G0S4 372 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 PRAMEF13Q5VWM6 474 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 NT5DC4Q86YG4 428 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 KIAA0825Q8IV33 1275 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 TMEM87BQ96K49 555 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 SPON2Q9BUD6 331 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 BRMS1Q9HCU9 246 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 PRR36Q9H6K5 1346 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms