RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
RN7SKP249-201ENST00000365490 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
RN7SKP249-201ENST00000365490 SIPA1L1O43166 1804 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 ORC4O43929 436 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 SLC3A2P08195 630 aaKnown RBP11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 MFSD6Q6ZSS7 791 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 C16orf86Q6ZW13 317 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 DEFB129Q9H1M3 183 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 RNF41Q9H4P4 317 aaPredicted RBP11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 VEZTQ9HBM0 779 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 SERPINB13Q9UIV8 391 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 PPP2R3BQ9Y5P8 575 aa11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
RN7SKP249-201ENST00000365490 TBC1D12O60347 775 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 HLA-DOAP06340 250 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 HMGB1P09429 215 aaKnown RBP11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 PSMA5P28066 241 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 COL9A3Q14050 684 aaPredicted RBP11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 RABEP1Q15276 862 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 FBXL16Q8N461 479 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 NCOA7Q8NI08 942 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 JAKMIP1Q96N16 626 aaKnown RBP11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 NEK1Q96PY6 1258 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 TMEM39BQ9GZU3 492 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 CNNM2Q9H8M5 875 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 RRAGCQ9HB90 399 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 INCENPQ9NQS7 918 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 GGA3Q9NZ52 723 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 SWAP70Q9UH65 585 aa11.57□□□□□ -0.56
RN7SKP249-201ENST00000365490 CDK8P49336 464 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 PDE4BQ07343 736 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 RUFY3Q7L099 469 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 DHX32Q7L7V1 743 aaKnown RBP11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 MB21D2Q8IYB1 491 aaPredicted RBP11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 NKX2-3Q8TAU0 364 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 DCPSQ96C86 337 aaKnown RBP11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 DYNLL2Q96FJ2 89 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 CSRNP1Q96S65 589 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 KRT23Q9C075 422 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 ALDH8A1Q9H2A2 487 aaPredicted RBP11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 ZNF287Q9HBT7 754 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 ZSWIM5Q9P217 1185 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 HERC5Q9UII4 1024 aaKnown RBP11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 NEDD4P46934 1319 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 WDR19Q8NEZ3 1342 aa11.56□□□□□ -0.56
RN7SKP249-201ENST00000365490 CASTP20810 708 aaKnown RBP11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 RASA1P20936 1047 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 RPS6KB1P23443 525 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 SHMT1P34896 483 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 TRDNQ13061 729 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 BLOC1S2Q6QNY1 142 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 ZSCAN29Q8IWY8 852 aaPredicted RBP11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 SLC44A5Q8NCS7 719 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 TTC14Q96N46 770 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 MTA3Q9BTC8 594 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 DNAJC18Q9H819 358 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 SCAF8Q9UPN6 1271 aaKnown RBP11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 CYP46A1Q9Y6A2 500 aa11.55□□□□□ -0.56
RN7SKP249-201ENST00000365490 B4E1Z4 1266 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 MCM5P33992 734 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 ANTXR2P58335 489 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 SLC4A8Q2Y0W8 1093 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 NBPF12Q5TAG4 269 aaPredicted RBP11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 CYB5R4Q7L1T6 521 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 RALYLQ86SE5 291 aaKnown RBP11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 LDHDQ86WU2 507 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 SULF1Q8IWU6 871 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 ESR2Q92731 530 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 HOOK2Q96ED9 719 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 CCDC17Q96LX7 622 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 AGXT2Q9BYV1 514 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 UPF3BQ9BZI7 483 aaKnown RBP11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 NMRK2Q9NPI5 230 aa11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 RBM19Q9Y4C8 960 aaKnown RBP11.54□□□□□ -0.56
RN7SKP249-201ENST00000365490 PHF20L1A8MW92 1017 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 KDM4AO75164 1064 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 PRDM1O75626 825 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 CPA1P15085 419 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 NOVP48745 357 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 NEK4P51957 841 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 SUPT20HL1Q3ZLR7 823 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 CDC37L1Q7L3B6 337 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 KRT26Q7Z3Y9 468 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 STK11IPQ8N1F8 1099 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 CRACR2BQ8N4Y2 399 aaPredicted RBP11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 IGDCC4Q8TDY8 1250 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 ANKS1AQ92625 1134 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 MKNK2Q9HBH9 465 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 TCP11L1Q9NUJ3 509 aa11.53□□□□□ -0.56
RN7SKP249-201ENST00000365490 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms