RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CSRNP1Q96S65 589 aa7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 CEP41Q9BYV8 373 aa7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 SOX17Q9H6I2 414 aaPredicted RBP7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 H2AFB2P0C5Z0 115 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 DUOXA2Q1HG44 320 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 RSPO4Q2I0M5 234 aaPredicted RBP7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 USPL1Q5W0Q7 1092 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 VN1R5Q7Z5H4 357 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 TP53INP1Q96A56 240 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 SSBP4Q9BWG4 385 aaPredicted RBP7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 EHD4Q9H223 541 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 TRAK1Q9UPV9 953 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 NAIPQ13075 1403 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 ADGRL3Q9HAR2 1447 aa7.76□□□□□ -1.17
RNU4-4P-201ENST00000364588 DYRK3O43781 588 aa7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 NKAPLQ5M9Q1 402 aa7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 PRPF40BQ6NWY9 871 aaKnown RBP7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 CCDC74AQ96AQ1 378 aa7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 CLEC4MQ9H2X3 399 aaPredicted RBP7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 SETD5Q9C0A6 1442 aa7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 RRBP1Q9P2E9 1410 aaKnown RBP7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 AFF2P51816 1311 aa7.75□□□□□ -1.17
RNU4-4P-201ENST00000364588 A0A096LPE4 126 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 A0A1W2PPZ6 126 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 TM4SF5O14894 197 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 TREHO43280 583 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 GLB1P16278 677 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 RXRBP28702 533 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 UVSSAQ2YD98 709 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 KLHDC7BQ96G42 594 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 MEGF10Q96KG7 1140 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 C8orf37Q96NL8 207 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 TCF12Q99081 682 aa7.74□□□□□ -1.17
RNU4-4P-201ENST00000364588 PNPLA6Q8IY17 1366 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 METTL12A8MUP2 240 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 ADAM11O75078 769 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 GADD45BO75293 160 aaPredicted RBP7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 WISP1O95388 367 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 ESRRAP11474 423 aaPredicted RBP7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 NLRP12P59046 1061 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 DZIP1LQ8IYY4 767 aaKnown RBP7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 AGGF1Q8N302 714 aaeCLIP7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 LRRC59Q96AG4 307 aaKnown RBP7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 ASB16Q96NS5 453 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 RNF208Q9H0X6 261 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 SEMA6BQ9H3T3 888 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 PPLO60437 1756 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 C1orf167Q5SNV9 1468 aa7.73□□□□□ -1.17
RNU4-4P-201ENST00000364588 ROBO2Q9HCK4 1378 aa7.72□□□□□ -1.17
RNU4-4P-201ENST00000364588 PTPN12Q05209 780 aaKnown RBP7.72□□□□□ -1.17
RNU4-4P-201ENST00000364588 PCDH1Q08174 1060 aa7.72□□□□□ -1.17
RNU4-4P-201ENST00000364588 HP1BP3Q5SSJ5 553 aaPredicted RBP7.72□□□□□ -1.17
RNU4-4P-201ENST00000364588 DDX54Q8TDD1 881 aaKnown RBP7.72□□□□□ -1.17
RNU4-4P-201ENST00000364588 UBASH3BQ8TF42 649 aa7.72□□□□□ -1.17
RNU4-4P-201ENST00000364588 ORAI2Q96SN7 254 aa7.72□□□□□ -1.17
RNU4-4P-201ENST00000364588 NLRP2Q9NX02 1062 aa7.72□□□□□ -1.17
RNU4-4P-201ENST00000364588 HFM1A2PYH4 1435 aa7.71□□□□□ -1.17
RNU4-4P-201ENST00000364588 PTCH1Q13635 1447 aa7.71□□□□□ -1.17
RNU4-4P-201ENST00000364588 PNMA6FA0A0J9YX94 578 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 SOX1O00570 391 aaPredicted RBP7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 ALX3O95076 343 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 ITPKAP23677 461 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 GRIA4P48058 902 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 DSC3Q14574 896 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 ENOX2Q16206 610 aaKnown RBP7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 ANKRD34AQ69YU3 496 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 KIAA1211Q6ZU35 1233 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 FBF1Q8TES7 1133 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 USP26Q9BXU7 913 aa7.71□□□□□ -1.18
RNU4-4P-201ENST00000364588 CDK12Q9NYV4 1490 aaPredicted RBP7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 DDX3YO15523 660 aaKnown RBP7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 ATP2B2Q01814 1243 aa7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 PLCB3Q01970 1234 aa7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 FMR1Q06787 632 aaKnown RBP eCLIP7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 SND1Q7KZF4 910 aaKnown RBP eCLIP7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 AEBP1Q8IUX7 1158 aa7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 RUSC1Q9BVN2 902 aa7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 ZNF576Q9H609 170 aa7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 ABCB6Q9NP58 842 aa7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 RPGRIP1LQ68CZ1 1315 aa7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 LAMC1P11047 1609 aa7.7□□□□□ -1.18
RNU4-4P-201ENST00000364588 RGS12O14924 1447 aa7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 RBM6P78332 1123 aaKnown RBP7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 GSTM4Q03013 218 aa7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 GRM2Q14416 872 aa7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 SPRED3Q2MJR0 410 aa7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 RGL3Q3MIN7 710 aa7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 RPS26P11Q5JNZ5 115 aaPredicted RBP7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 FDX2Q6P4F2 183 aa7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 ZFYVE1Q9HBF4 777 aa7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 PPP4R2Q9NY27 417 aa7.69□□□□□ -1.18
RNU4-4P-201ENST00000364588 LOC100289279A0A1B0GTE1 492 aa7.68□□□□□ -1.18
RNU4-4P-201ENST00000364588 B3GALT4O96024 378 aa7.68□□□□□ -1.18
RNU4-4P-201ENST00000364588 XRCC5P13010 732 aaKnown RBP7.68□□□□□ -1.18
RNU4-4P-201ENST00000364588 XPCQ01831 940 aaPredicted RBP7.68□□□□□ -1.18
RNU4-4P-201ENST00000364588 PRR23CQ6ZRP0 262 aa7.68□□□□□ -1.18
RNU4-4P-201ENST00000364588 UTP4Q969X6 686 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms